dkobak / tsne-umap-initLinks
Initialization is critical for preserving global data structure in both t-SNE and UMAP
☆24Updated 4 years ago
Alternatives and similar repositories for tsne-umap-init
Users that are interested in tsne-umap-init are comparing it to the libraries listed below
Sorting:
- ☆11Updated 5 months ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆31Updated 3 years ago
- Perform inference on algorithm-agnostic variable importance in Python☆20Updated 3 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆59Updated 4 years ago
- Graph regularized nonnegative matrix factorization (GNMF) in Python☆45Updated 5 years ago
- Fast Laplacian Eigenmaps: lightweight multicore LE for non-linear dimensional reduction with minimal memory usage. Outperforms sklearn's …☆23Updated 3 years ago
- Probabilistic contrastive principal component analysis (PCPCA)☆24Updated 3 years ago
- c-lasso: a Python package for constrained sparse regression and classification☆32Updated 4 years ago
- Here we address the global structure preservation by tSNE and UMAP☆47Updated 5 years ago
- A Python package for General Graphical Lasso computation☆38Updated 8 months ago
- Parallel opt-SNE implementation with Python wrapper☆37Updated 3 years ago
- Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…☆20Updated 2 years ago
- ☆15Updated 4 years ago
- Splotch is a hierarchical generative probabilistic model for analyzing Spatial Transcriptomics (ST) data☆21Updated 5 months ago
- Use LSTM neural network for 1D distributional data prediction☆22Updated 3 years ago
- Systematically learn and evaluate manifolds from high-dimensional data☆102Updated last week
- A Library for Denoising Single-Cell Data with Random Matrix Theory☆37Updated 2 years ago
- Tools for building and manipulating graphs in Python☆43Updated last week
- ☆15Updated 5 years ago
- Code repository for the paper "Towards a Comprehensive Evaluation of Dimension Reduction Methods for Data Visualization"☆14Updated last year
- A spectral method for assessing and combining multiple data visualizations☆50Updated 2 years ago
- Explaining dimensionality results using SHAP values☆55Updated 9 months ago
- This is a read-only mirror of the CRAN R package repository. SNFtool — Similarity Network Fusion☆22Updated 4 years ago
- A Bayesian group factor model with structured sparsity☆21Updated 9 years ago
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆70Updated 3 weeks ago
- Easy visualization and evaluation of matrix and tensor factorization models☆17Updated 2 years ago
- Source code for integrative nonnegative matrix factorization☆19Updated 7 years ago
- R package for Non-negative Tensor Decomposition☆19Updated last year
- Contrastive PCA☆227Updated 3 weeks ago
- Residual Component Analysis☆10Updated 8 years ago