xinxingwu-uk / FAE
☆12Updated 2 years ago
Alternatives and similar repositories for FAE:
Users that are interested in FAE are comparing it to the libraries listed below
- Fast Laplacian Eigenmaps: lightweight multicore LE for non-linear dimensional reduction with minimal memory usage. Outperforms sklearn's …☆23Updated 3 years ago
- ☆15Updated last year
- Convolutional Embedded Networks for Population Scale Clustering and Bio-ancestry Inferencing☆11Updated 5 years ago
- Code for WACV 2022 paper "Generalized Clustering and Multi-Manifold Learning with Geometric Structure Preservation"☆19Updated 2 years ago
- ☆17Updated 7 years ago
- ☆16Updated 4 years ago
- Network Fusion for Composite Community Extraction☆10Updated 4 years ago
- Code for the paper "End-to-end training of deep probabilistic CCA on paired biomedical observations".☆25Updated 3 years ago
- Imputation of single cell RNA-sequencing data with autoencoder☆16Updated 3 years ago
- ☆9Updated 5 years ago
- Tensorflow implementation for Deep Cognitive Subspace Clustering (DeepCogSC)☆11Updated 5 years ago
- An Internal Validity Index Based on Density-Involved Distance (2019).☆16Updated last month
- Shared Nearest Neighbor Clustering Algorithm: Implementation and Evaluation☆29Updated 5 years ago
- Implementations in both Matlab and R of the CIMLR method. The manuscript of the method is available at: https://www.nature.com/articles/s…☆17Updated last year
- single-cell graph autoencoder☆21Updated 3 years ago
- ESANN20 paper code repository. This package is a perplexity-free extension of Parametric t-SNE dimensionality reduction method implemente…☆21Updated last year
- FeatureSelect☆22Updated 5 years ago
- Initialization is critical for preserving global data structure in both t-SNE and UMAP☆22Updated 4 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Updated 2 years ago
- This is a read-only mirror of the CRAN R package repository. SNFtool — Similarity Network Fusion☆18Updated 3 years ago
- Official implementation of Joint Multidimensional Scaling☆22Updated last year
- Maximum mean discrepancy comparisons for single cell profiling experiments☆15Updated 3 years ago
- PyTorch implementation of BasisVAE: Translation-invariant feature-level clustering with Variational Autoencoders☆41Updated 4 years ago
- ☆14Updated 2 years ago
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆12Updated 2 years ago
- ☆16Updated 2 years ago
- Ultra-fast clustering of very large single cell RNA-seq data☆10Updated 3 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆22Updated 3 years ago
- An interpretable deep learning model for cancer classification using high-dimensional omics data☆15Updated 3 years ago
- Code repository for the paper "Towards a Comprehensive Evaluation of Dimension Reduction Methods for Data Visualization"☆11Updated 8 months ago