Alternatives and similar repositories for DeepMASS2_GUI

Users that are interested in DeepMASS2_GUI are comparing it to the libraries listed below

• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆15Updated 2 years ago
• PHOENIXcenter / deeprtalign
  a deep learning-based retention time alignment tool for large cohort LC-MS data analysis
  ☆12Updated last year
• danielatrivella / NP3_MS_Workflow
  A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis
  ☆13Updated last week
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated last year
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• ZhuMetLab / MetDNA2
  Knowledge-guided multilayer network approach is executed in MetDNA2
  ☆16Updated 2 years ago
• ZhuMSLab / DecoMetDIA
  ☆11Updated 2 years ago
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• yufree / pmd
  Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
  ☆10Updated last month
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆14Updated 8 years ago
• mwang87 / GNPS_MASST
  ☆12Updated last month
• vsegurar / DeepMSPeptide
  ☆17Updated 5 years ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 3 years ago
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• computational-chemical-biology / ChemWalker
  ☆11Updated 11 months ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆10Updated 4 years ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆13Updated 2 years ago
• wilsontom / msconverteR
  Create .mzML files through the R Console
  ☆11Updated 3 years ago
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 2 years ago
• MRMkit / MRMkit
  ☆9Updated last month
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆22Updated 4 years ago
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆9Updated 5 years ago
• biosustain / snakemake_UmetaFlow
  Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake
  ☆26Updated 5 months ago
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 2 years ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆12Updated last month
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆14Updated 6 months ago
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆16Updated last year