xuehansheng / DeepMNE-CNNLinks
[Briefings in Bioinformatics'20] Integrating multi-network topology for gene function prediction using deep neural networks
☆14Updated 6 years ago
Alternatives and similar repositories for DeepMNE-CNN
Users that are interested in DeepMNE-CNN are comparing it to the libraries listed below
Sorting:
- A hierarchical deep learning framework for ncRNA-protein interaction prediction.☆14Updated 2 years ago
- [AAAI'22] RepBin: Constraint-Based Graph Representation Learning for Metagenomic Binning☆22Updated last year
- Predicting ncRNA-protein interaction using high-level features based on deep learning☆15Updated 5 years ago
- Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"☆10Updated 3 years ago
- ☆17Updated 4 years ago
- A positive-unlabeled ensemble learning framework for disease gene prioritization.☆20Updated last month
- BertSNR: an interpretable deep learning framework for single nucleotide resolution identification of transcription factor binding sites b…☆12Updated 4 months ago
- ☆14Updated 8 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆15Updated 6 years ago
- ☆12Updated last month
- ☆15Updated 3 years ago
- ☆10Updated 4 years ago
- GCN classifier for phage taxanomy classification☆31Updated 10 months ago
- This is a python package for genomics study with a GCN framework.☆43Updated 9 months ago
- ☆11Updated 3 years ago
- ☆18Updated last year
- Deep learning based prediction of IsoForm FUnctions from Sequences and Expression☆15Updated 2 months ago
- Code for paper "Principled feature attribution for unsupervised gene expression analysis"☆12Updated 2 years ago
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆12Updated 2 years ago
- a variational autoencoder method for clustering single-cell mutation data☆12Updated last year
- ☆14Updated last year
- ☆18Updated last year
- A novel biclustering algorithm for analyses of transcriptomic data.☆18Updated 6 years ago
- This repository contains all DeepCLIP Python code☆11Updated last year
- multiway chromatin interaction, 3D genome, single-nucleus, hypergraph representation learning☆29Updated 3 years ago
- GraphProt: modelling binding preferences of RNA-binding proteins☆20Updated 7 years ago
- An Interpretable Self-Attention Network with block-attention and attention-attribution.☆12Updated 2 years ago
- rnalib: a python-based transcriptomics library☆11Updated 4 months ago
- Leveraging Heterogeneous Network Embedding for Metabolic Pathway Prediction☆16Updated 4 years ago
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago