☆17Jun 15, 2026Updated last month
Alternatives and similar repositories for dnabarcoder
Users that are interested in dnabarcoder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Sep 27, 2024Updated last year
- Sequence Taxonomic Assignment by Massive Pairwise Alignments☆14Jun 27, 2023Updated 3 years ago
- GPU-accelerated DNA barcode classification☆14Jan 2, 2025Updated last year
- ITS region extraction for long-read amplicon sequencing☆18May 28, 2026Updated last month
- Informatic Sequence Classification Trees☆15Jan 23, 2026Updated 5 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- AmpliCI, a model-based algorithm for denoising Illumina amplicon data.☆25Nov 28, 2025Updated 7 months ago
- A repository for storing code and data related to a systematic comparison of short read taxonomy assignment tools☆16Oct 11, 2017Updated 8 years ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆18Jul 31, 2025Updated 11 months ago
- Fungal Validation and Identification Pipeline☆15Jul 13, 2026Updated last week
- Speedy versions of phyloseq functions☆48Apr 21, 2024Updated 2 years ago
- Mostly useful scripts and files for processing MiSeq amplicon data☆18Jul 1, 2016Updated 10 years ago
- micca - MICrobial Community Analysis☆19Feb 12, 2020Updated 6 years ago
- R package to access Bio-Oracle data via ERDDAP☆18Jun 16, 2026Updated last month
- Tutorial for biodiversity data cleaning for ENM 2020☆14Feb 7, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Software to trim the ITS region of FASTQ sequences for amplicon sequencing analysis☆19Mar 26, 2025Updated last year
- Powerful and robust non-parametric association testing for microbiome data via a zero-inflated quantile approach☆12Mar 21, 2024Updated 2 years ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆22Aug 16, 2024Updated last year
- Distance denoise by Entropy☆15Oct 17, 2025Updated 9 months ago
- Dispersal simulations based on ecological niches☆16Dec 7, 2023Updated 2 years ago
- Prediction of glycopeptide fragment mass spectra by deep learning☆12Feb 20, 2024Updated 2 years ago
- A web app for environmental DNA metabarcoding analysis☆11Dec 30, 2021Updated 4 years ago
- PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S rRNA, ITS and COI marker genes☆32Mar 21, 2026Updated 4 months ago
- R package providing utilities for INLA☆31Nov 23, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations☆15Nov 24, 2025Updated 7 months ago
- This is the source code for ARGs-OAP v2.0 construction☆13Aug 1, 2019Updated 6 years ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆34Mar 21, 2026Updated 4 months ago
- motus - a tool for marker gene-based OTU (mOTU) profiling☆180Updated this week
- genomic variant frequency estimation☆12Sep 7, 2025Updated 10 months ago
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆18Sep 5, 2025Updated 10 months ago
- Python toolkit and package for analyzing enzyme activity data☆12Jun 17, 2022Updated 4 years ago
- a brief tutorial on running Maxent in R☆32Oct 11, 2017Updated 8 years ago
- AI co-scientist☆37Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MetagenOmic read Re-Assigner and abundance quantifier☆20Jun 24, 2026Updated 3 weeks ago
- nf-core/phyloplace is a bioinformatics best-practice analysis pipeline that performs phylogenetic placement with EPA-NG.☆12Jun 16, 2026Updated last month
- creating hybrid-gene phylogenetic trees for diversity analyses☆30Aug 23, 2022Updated 3 years ago
- Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) i…☆12Sep 18, 2022Updated 3 years ago
- ARCHIVED Access sequences from the 1000 Plant Initiative (1KP)☆13Nov 7, 2025Updated 8 months ago
- Library of snakemake rules.☆13Oct 2, 2018Updated 7 years ago
- Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs…☆13Apr 21, 2026Updated 3 months ago