usnistgov / MISTLinks
Microscopy Image Stitching Tool
☆150Updated last month
Alternatives and similar repositories for MIST
Users that are interested in MIST are comparing it to the libraries listed below
Sorting:
- MIST-inspired microscope image stitching package☆75Updated last year
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆35Updated 3 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated last month
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆45Updated 2 months ago
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆149Updated 2 months ago
- ilastik-shell, applets, and workflows to string them together.☆381Updated last week
- The ImageJ plugin to run deep-learning models☆98Updated last month
- The python-microscopy environment - an open-source package for light microscopy☆91Updated last month
- Microscope control and image acquisition integrated with ImageJ☆284Updated last week
- Open Source Cross-Platform C++ library to read CZI image files☆72Updated 2 years ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆151Updated last month
- Cockpit is a microscope graphical user interface. It is a flexible and easy to extend platform aimed at life scientists using bespoke mic…☆38Updated last month
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆77Updated 3 months ago
- Fiji library to perform image segmentation based on the Weka learning schemes☆118Updated 11 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆27Updated 5 years ago
- Python library for control of microscope devices, supporting hardware triggers and distribution of devices over the network for performan…☆79Updated last month
- Python control of micro-manager for customized data acquisition☆173Updated 3 weeks ago
- Montaging for microscopy imaging files☆30Updated 2 weeks ago
- GPU accelerated 3D image deconvolution using CUDA☆36Updated last year
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆55Updated 2 months ago
- A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.☆91Updated 11 months ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆62Updated 6 months ago
- A general illumination correction method for optical microscopy.☆42Updated 4 years ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- ImageJ plugin for morphological data mining, 3D modeling and image stitching, registration, editing and annotation.☆32Updated 11 months ago
- Create 3D/4D animations using a natural language-based syntax☆60Updated 3 months ago
- Versatile acquisition software for serial block-face electron microscopy☆24Updated last week
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆84Updated last week
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆67Updated last week
- The ImageJ wiki☆28Updated this week