Deep Electron Microscopy Image Stitching (DEMIS): a tool for stitching grids of electron microscopy images. Image matching is performed using LoFTR.
☆16Dec 29, 2025Updated 7 months ago
Alternatives and similar repositories for demis
Users that are interested in demis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Mar 18, 2024Updated 2 years ago
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆16Apr 13, 2019Updated 7 years ago
- RAPID: a Real-time, GPU-Accelerated Parallelized Image processing software for large-scale multiplexed fluorescence microscopy Data☆12Dec 3, 2022Updated 3 years ago
- Microscopy Image Stitching Tool☆176Jul 28, 2026Updated last week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆22Mar 12, 2026Updated 4 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆17Feb 23, 2024Updated 2 years ago
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆27Feb 24, 2026Updated 5 months ago
- ☆17Feb 16, 2023Updated 3 years ago
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆40Jul 2, 2026Updated last month
- ☆17May 16, 2024Updated 2 years ago
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆34Aug 3, 2026Updated last week
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆15Apr 16, 2026Updated 3 months ago
- S/TEM Automated Nanoparticle Analysis☆35Apr 13, 2026Updated 3 months ago
- Scripts for building, training and validating CNNs for Connectomics☆12Mar 24, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This repository is for the openFrame microscope and supporting projects☆16Updated this week
- Framework for registration of sequential digitized histology slices☆30Mar 24, 2022Updated 4 years ago
- Automatic Correction for sCMOS-related Noise☆18Nov 18, 2021Updated 4 years ago
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 6 months ago
- Generates simulated confocal data from a ground truth signal☆11Aug 16, 2022Updated 3 years ago
- A 3D printed modification to the DLP4710EVM DMD to turn it into a lab-usable spatial light modulator.☆16Apr 5, 2021Updated 5 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆21Feb 10, 2026Updated 6 months ago
- ☆10Updated this week
- A napari plugin for zarr backed OME-NGFF images☆54Jul 31, 2026Updated last week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Python wrapper for the scripting interface of Thermo Fisher Scientific and FEI microscopes.☆49Mar 30, 2026Updated 4 months ago
- Modular microscope control in LabView.☆14Jan 20, 2026Updated 6 months ago
- ☆13Jun 17, 2026Updated last month
- Stitch multiple Visium slides together☆17Oct 16, 2025Updated 9 months ago
- Spectral Imaging and Electron Energy Loss Spectroscopy Analysis☆10Mar 5, 2018Updated 8 years ago
- Control and Automation of Transmission Electron Microscopes☆15Aug 12, 2022Updated 3 years ago
- ☆12Feb 5, 2026Updated 6 months ago
- A program interfacing Segment Anything with cryoSPARC via cryosparc-tools to efficiently identify vesicle-embedded membrane proteins and …☆13Feb 18, 2025Updated last year
- High quality visualization for volumetric image data☆62Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- open-source structured illumination add-on for fluorescence microscopes☆17Jan 8, 2024Updated 2 years ago
- ☆18Jan 13, 2025Updated last year
- A Hyperspy extension package for processing and reconstructing electron tomography data☆16Jul 21, 2026Updated 2 weeks ago
- CryoSPARC is the state-of-the-art platform used globally for obtaining 3D structural information from single particle cryo-EM data. The …☆15May 4, 2026Updated 3 months ago
- Upload a Jupyter notebook as a Gist with the click of a button.☆20Sep 28, 2023Updated 2 years ago
- PDIndexer is a powder X-ray / neutron diffraction analysis tool: it displays diffraction profiles, overlays the calculated diffraction li…☆15Updated this week
- ☆16Updated this week