InsightSoftwareConsortium / ITKMontageLinks
Montaging for microscopy imaging files
☆30Updated last month
Alternatives and similar repositories for ITKMontage
Users that are interested in ITKMontage are comparing it to the libraries listed below
Sorting:
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆56Updated 3 months ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆62Updated 6 months ago
- A general illumination correction method for optical microscopy.☆42Updated 4 years ago
- A napari plugin for itk-elastix☆39Updated 2 weeks ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆45Updated 2 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 2 months ago
- simple package for augmentation of n-dimensional arrays☆33Updated 2 years ago
- Fast global mutual information-based rigid alignment in the Fourier domain☆32Updated last year
- Process images using SimpleITK in napari☆22Updated 5 months ago
- Script that registers Histology slices to volumetric image data☆11Updated 2 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆68Updated last month
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆35Updated last week
- Easily read and write ome-tiff images in python☆27Updated last year
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated last week
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- Lattice light-sheet post-processing utility.☆29Updated last month
- Tool for segmentation in bioimaging☆35Updated this week
- 2D image registration in python, using napari.☆16Updated 3 years ago
- Python package for deep learning based image to image transformation☆53Updated last month
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆88Updated last year
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆15Updated 6 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆27Updated 5 years ago
- Three-dimensional residual channel attention networks☆55Updated 2 years ago
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆12Updated 4 years ago
- GPU accelerated 3D image deconvolution using CUDA☆37Updated last year
- Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development☆32Updated 2 years ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated 5 months ago
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 3 weeks ago