Fiji's Stitching plugins reconstruct big images from tiled input images.
☆115Jan 22, 2025Updated last year
Alternatives and similar repositories for Stitching
Users that are interested in Stitching are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ImgLib2/BDV implementation of Stitching for large datasets☆80Mar 11, 2026Updated last week
- PSFj - Know your microscope fluorescence☆24Mar 6, 2020Updated 6 years ago
- Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher☆23Aug 29, 2024Updated last year
- Automated Segmentation of cellular substructures in Electron Microscopy☆18Jan 28, 2026Updated last month
- ImageJ/Fiji plugin to analyze 2D and 3D skeleton images☆28Jun 14, 2022Updated 3 years ago
- Fiji module for image transformation and related algorithms☆70Oct 16, 2025Updated 5 months ago
- Fiji package for registering and transforming arbitrarily large sequences of images☆19Sep 22, 2022Updated 3 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆93Mar 5, 2024Updated 2 years ago
- Akanksha Periwal | Sai Harshini Nimmala☆23May 14, 2017Updated 8 years ago
- C and NVidia CUDA code for multi-view deconvolution☆11Jul 25, 2016Updated 9 years ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Sep 26, 2024Updated last year
- Fiji/ImageJ macros to quickly add a scale bar to an (electron microscopy) image.☆13Apr 23, 2025Updated 11 months ago
- A €12 portable bench power supply unit (USB C PD)☆12Dec 1, 2020Updated 5 years ago
- An R Package for general purpose TIFF file I/O which plays nice with ImageJ☆17Jan 26, 2026Updated last month
- Fiji's plugin for colocalization analysis☆28Feb 24, 2025Updated last year
- ImageJ/TensorFlow integration library☆26Oct 1, 2025Updated 5 months ago
- Model repository for bioimage.io☆17Aug 7, 2023Updated 2 years ago
- 3-d data viewers for glue based on VisPy☆28Feb 11, 2026Updated last month
- A "batteries-included" distribution of ImageJ☆937Dec 26, 2025Updated 2 months ago
- Binary releases of Vaa3D and related software components☆45Nov 11, 2023Updated 2 years ago
- Recording software for andor cameras with the possibility of implementing analysis in real time☆12Aug 12, 2019Updated 6 years ago
- Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy E…☆416Updated this week
- Icy kernel module☆58Mar 6, 2026Updated 2 weeks ago
- ImgLib2-based viewer for registered SPIM stacks and more☆42Mar 4, 2026Updated 2 weeks ago
- Just the latest revision of a former GPLv3 project, no malice intended☆13May 25, 2022Updated 3 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆61Jul 18, 2025Updated 8 months ago
- Fiji website☆38Nov 1, 2025Updated 4 months ago
- ☆13Feb 27, 2024Updated 2 years ago
- A simple single-photo resection program written in python.☆16Oct 13, 2020Updated 5 years ago
- Tools and scripts for EASI-FISH image data analysis☆17Oct 19, 2022Updated 3 years ago
- This is a tutorial in the form of a Jupyter notebook☆13Mar 1, 2019Updated 7 years ago
- Set of Dockerfile to build a ready-to-use OMERO server☆15Oct 5, 2017Updated 8 years ago
- KNIME Image Processing Extension☆50Nov 25, 2025Updated 3 months ago
- Microscope control and image acquisition integrated with ImageJ☆299Updated this week
- ☆40Updated this week
- quantixed FIJI update site☆17Jan 9, 2026Updated 2 months ago
- Conducts image stitching upon an input video to generate a panorama in 3D☆305Oct 1, 2021Updated 4 years ago
- ImageJ2 programming examples☆197Mar 20, 2023Updated 3 years ago
- Stitching of large tiled datasets☆22Feb 13, 2026Updated last month