sseemayer / mixemLinks
Pythonic Expectation-Maximization (EM) implementation for fitting mixtures of probability densities
☆26Updated 4 years ago
Alternatives and similar repositories for mixem
Users that are interested in mixem are comparing it to the libraries listed below
Sorting:
- A tool for generating heatmaps from hierarchically clustered data.☆40Updated 7 years ago
- markov cluster algorithm - python☆82Updated 8 years ago
- Tool to easily start up an IPython cluster on different schedulers.☆146Updated 5 years ago
- A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.☆323Updated 7 years ago
- Hive Plots in using Python & matplotlib!☆71Updated 7 years ago
- Ten Simple Rules for Making Research Software More Robust. Manuscript is published at PLoS Computational Biology. Feedback is welcome!☆12Updated 8 years ago
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 8 years ago
- A python library for generating a clustered heatmap with dendrograms.☆34Updated 3 years ago
- DEPRECATED. Please visit our new repository (cytoscape/cyREST)☆27Updated 8 years ago
- Resources for a talk about streaming data analysis in Python☆15Updated 10 years ago
- A small package of software which will help you configure an automated build and publish process, using Travis CI and GitHub Pages.☆106Updated 9 years ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆125Updated 2 years ago
- Easily map Python functions onto a cluster using a DRMAA-compatible grid engine like Sun Grid Engine (SGE).☆85Updated 2 years ago
- a Python 3 command-line tool to maintain a DB mirror of MEDLINE (https://pypi.python.org/pypi/medic) - ALERT: As I have moved out of scie…☆25Updated 10 years ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆30Updated 5 years ago
- give us a DOI and we'll do our best to get you the BibTeX entry☆121Updated 8 years ago
- IPython running in a docker container. This image can be used to integrate IPython into Galaxy☆17Updated 9 years ago
- ☆34Updated 8 years ago
- markov clustering in python☆175Updated 4 years ago
- Python wrapper around the C DRMAA library.☆108Updated 6 years ago
- Denoising Autoencoders for Phenotype Stratification☆42Updated 7 years ago
- CGAT-ruffus is a lightweight python module for running computational pipelines☆175Updated 4 years ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14Updated 7 years ago
- submit jobs to slurm with quick-and-dirty python☆95Updated 3 years ago
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆20Updated 9 years ago
- This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…☆50Updated 8 years ago
- The Clustergrammer interactive Jupyter notebook widget☆47Updated 3 years ago
- Learn interpretable computational phenotyping models from k-merized genomic data☆52Updated 3 years ago
- Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.☆83Updated 5 years ago
- A collection of Python scripts that implement various graph clustering algorithms, specifically for identifying protein complexes from pr…☆96Updated 7 years ago