ImSoErgodic / py-upsetLinks
A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.
☆319Updated 7 years ago
Alternatives and similar repositories for py-upset
Users that are interested in py-upset are comparing it to the libraries listed below
Sorting:
- Draw UpSet plots with Matplotlib☆363Updated last year
- Python utilities for Cytoscape and Cytoscape.js☆176Updated 3 years ago
- Area-weighted venn-diagrams for Python/matplotlib☆555Updated 6 months ago
- A tool for generating heatmaps from hierarchically clustered data.☆40Updated 7 years ago
- Hive Plots in using Python & matplotlib!☆71Updated 7 years ago
- A minimalist tree plotting library using toyplot graphs☆179Updated this week
- UpSet - Visualizing Intersecting Sets☆239Updated 3 years ago
- NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.☆223Updated 2 months ago
- An interactive heatmap visualization built using D3.js☆235Updated 2 years ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆126Updated 2 years ago
- 2 ~ 6 sets venn diagram for python☆346Updated last year
- create sankey diagrams with matplotlib☆274Updated last year
- The Clustergrammer interactive Jupyter notebook widget☆47Updated 2 years ago
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆40Updated 4 years ago
- visJS2jupyter is a tool to bring the interactivity of networks created with vis.js into jupyter notebook cells☆78Updated 2 years ago
- A Python package for exploring and analysing genetic variation data☆298Updated 2 weeks ago
- "Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.☆118Updated 2 years ago
- Fast, flexible and extensible genome browser.☆332Updated 3 weeks ago
- Python port of the Unidip clustering algorithm from: http://www.kdd.org/kdd2016/subtopic/view/skinny-dip-clustering-in-a-sea-of-noise☆37Updated last year
- Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection …☆847Updated last week
- A flexible version of CorEx developed for bio-data challenges that handles missing data, continuous/discrete variables, multi-CPU, overla…☆143Updated 3 years ago
- CGAT-ruffus is a lightweight python module for running computational pipelines☆174Updated 4 years ago
- supervenn: precise and easy-to-read multiple sets visualization in Python☆353Updated 10 months ago
- Tool to easily start up an IPython cluster on different schedulers.☆146Updated 5 years ago
- Python, R and Matlab implementation of Brown's Method to combine dependent P-values☆25Updated 7 years ago
- PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.☆524Updated 5 months ago
- This is the maintened version of PySankey (pySankeyBeta on Pypi)☆42Updated last week
- Scalable genetics toolkit☆262Updated 2 months ago
- plot chord diagram with matplotlib☆83Updated 3 years ago