GuyAllard / markov_clustering
markov clustering in python
☆169Updated 3 years ago
Alternatives and similar repositories for markov_clustering:
Users that are interested in markov_clustering are comparing it to the libraries listed below
- A package for combining multiple partitions into a consolidated clustering. The combinatorial optimization problem of obtaining such a co…☆70Updated 2 years ago
- A collection of Python scripts that implement various graph clustering algorithms, specifically for identifying protein complexes from pr…☆94Updated 6 years ago
- Implementation of the Louvain algorithm for community detection with various methods for use with igraph in python.☆247Updated 5 months ago
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆40Updated 3 years ago
- An extended package for clustering similarity☆64Updated last month
- ☆30Updated 7 years ago
- Code for ensemble clustering☆101Updated 3 years ago
- scikit-fusion: Data fusion via collective latent factor models☆147Updated last year
- Hierarchical graph clustering☆38Updated 6 years ago
- plot chord diagram with matplotlib☆84Updated 3 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆58Updated 4 years ago
- The need to understand cell developmental processes has spawned a plethora of computational methods for discovering hierarchies from scRN…☆147Updated 3 years ago
- Python, R and Matlab implementation of Brown's Method to combine dependent P-values☆25Updated 7 years ago
- SNAP Python code, SWIG related files☆299Updated 2 years ago
- Integrative orthogonal non-negative matrix factorization☆31Updated 5 years ago
- Programs to identify link communities in complex networks☆93Updated 4 years ago
- Global spectral clustering in dynamic networks☆20Updated 6 years ago
- Community Discovery Library☆383Updated 5 months ago
- Py3plex - A multilayer complex network visualization and analysis library in python3☆162Updated last year
- ☆16Updated last month
- Python Wrapper for FIt-SNE☆45Updated 3 years ago
- Fisher exact test for mxn contingency table in python☆38Updated 7 months ago
- OhmNet: Representation learning in multi-layer graphs☆82Updated 4 years ago
- Implementation of the Leiden algorithm for various quality functions to be used with igraph in Python.☆639Updated 4 months ago
- Java package that provides data structures and algorithms for network analysis.☆146Updated last year
- A package for computing Graph Kernels☆103Updated last year
- ☆137Updated 3 years ago
- Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.☆32Updated last year
- NetLSD descriptors for graphs. Compare and analyze graph structure on multiple levels!☆59Updated 4 years ago
- Hypergraph Algorithms Package☆94Updated last year