sofroniewn / tutorial-scipy2021-bioimage-analysis-fundamentals
Tutorial for SciPy 2021 Bioimage Analysis Fundamentals in Python
☆31Updated 3 years ago
Alternatives and similar repositories for tutorial-scipy2021-bioimage-analysis-fundamentals:
Users that are interested in tutorial-scipy2021-bioimage-analysis-fundamentals are comparing it to the libraries listed below
- Course material for fundamentals in digital image processing☆21Updated 5 years ago
- The repository of NEUBIAS textbook 2021☆10Updated 3 years ago
- Process images using SimpleITK in napari☆20Updated 5 months ago
- website for the napari image viewer☆44Updated this week
- ☆17Updated 2 years ago
- Course material for Data Analysis and Visualization with Python☆21Updated 6 months ago
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆62Updated last year
- Linking napari layers with Matplotlib plots☆40Updated last week
- Lectures for a napari training course☆50Updated last year
- Yet Another Pixel Classifier (based on deep learning)☆35Updated 9 months ago
- A platform for compiling, analyzing, and exploring tracking data☆43Updated 2 weeks ago
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆25Updated 3 weeks ago
- Discover, install, and share napari plugins☆51Updated this week
- A python script editor plugin for napari☆11Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 7 months ago
- ☆16Updated 2 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆15Updated 2 weeks ago
- Accelerated Pixel and Object Classifiers (APOC)☆55Updated last month
- ☆20Updated last year
- ☆12Updated 4 years ago
- Generate markdown notebooks from ImageJ Macro☆24Updated 4 years ago
- ☆14Updated this week
- Creating figures and animations for multi-channel images with a focus on microscopy.☆73Updated 3 months ago
- Get Your Brain Together Neuroimage Registration Workshops and Hackathons☆20Updated 4 months ago
- OUT-OF-DATE! The new book is at https://bioimagebook.github.io☆21Updated 8 years ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 3 months ago
- Easily read and write ome-tiff images in python☆26Updated 10 months ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆38Updated 8 months ago
- StarDist plugin for napari☆37Updated 7 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 5 months ago