sofroniewn / tutorial-scipy2021-bioimage-analysis-fundamentalsLinks
Tutorial for SciPy 2021 Bioimage Analysis Fundamentals in Python
☆31Updated 4 years ago
Alternatives and similar repositories for tutorial-scipy2021-bioimage-analysis-fundamentals
Users that are interested in tutorial-scipy2021-bioimage-analysis-fundamentals are comparing it to the libraries listed below
Sorting:
- website for the napari image viewer☆47Updated this week
- Course material for fundamentals in digital image processing☆23Updated 6 years ago
- Lectures for a napari training course☆50Updated 2 years ago
- Discover, install, and share napari plugins☆54Updated last month
- Course material for Data Analysis and Visualization with Python☆24Updated last month
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Updated last year
- StarDist plugin for napari☆38Updated last year
- Process images using SimpleITK in napari☆23Updated 8 months ago
- ☆24Updated 4 months ago
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆63Updated 2 years ago
- napari widgets for start-to-finish batch processing☆15Updated 2 weeks ago
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- Creating figures and animations for multi-channel images with a focus on microscopy.☆79Updated last year
- Yet Another Pixel Classifier (based on deep learning)☆36Updated last year
- Linking napari layers with Matplotlib plots☆42Updated last week
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆152Updated last week
- The repository of NEUBIAS textbook 2021☆11Updated 3 years ago
- ☆22Updated 2 years ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 8 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- ☆15Updated 3 years ago
- Introduction to Numpy and Pandas☆59Updated 5 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last month
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆29Updated 2 months ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 4 months ago
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆175Updated 8 months ago
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Updated last year
- Collection of useful (to me) python scripts for interacting with napari☆11Updated 3 years ago