Alternatives and similar repositories for LDPC_DNA_storage

Users that are interested in LDPC_DNA_storage are comparing it to the libraries listed below

• ntpz870817 / Chamaeleo
  BGI DNA Storage Kit
  ☆43Updated 10 months ago
• uwmisl / data-nbt17
  Data for paper "Random Access in Large-Scale DNA Data Storage"
  ☆12Updated 7 years ago
• shubhamchandak94 / nanopore_dna_storage
  DNA storage for nanopore sequencing using convolutional coding and basecaller-decoder integration
  ☆22Updated 2 years ago
• microsoft / clustered-nanopore-reads-dataset
  A dataset of real DNA traces for benchmarking trace reconstruction algorithms
  ☆21Updated last year
• shubhamchandak94 / VT_codes
  Python implementation of Varshamov-Tenengolts codes for correction of single insertion/deletion errors
  ☆12Updated 5 years ago
• itaiorr / Deep-DNA-based-storage
  Deep DNA Storage: Scalable and Robust DNA-based Storage via Coding Theory and Deep Learning
  ☆17Updated 6 months ago
• HaolingZHANG / DNASpiderWeb
  SPIDER-WEB generates coding algorithms with superior error tolerance and real-time information retrieval capacity
  ☆11Updated last year
• Guanjinqu / Clover
  An Efficient DNA Clustering algorithm based on Tree Structure.
  ☆16Updated 2 years ago
• lucidrains / enformer-pytorch
  Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch
  ☆542Updated 4 months ago
• calico / basenji
  Sequential regulatory activity predictions with deep convolutional neural networks.
  ☆458Updated 6 months ago
• Illumina / SpliceAI
  A deep learning-based tool to identify splice variants
  ☆470Updated 4 months ago
• Genentech / gReLU
  gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
  ☆303Updated last month
• QData / DeepDiffChrome
  "DeepDiff: Deep-learning for predicting Differential gene expression from histone modifications", Bioinformatics, Volume 34, Issue 17,
  ☆21Updated 5 years ago
• modernatx / seqlike
  Unified biological sequence manipulation in Python
  ☆207Updated last year
• google-research / proteinfer
  Deep networks for protein functional inference
  ☆180Updated 5 months ago
• frederikkemarin / BEND
  Benchmarking DNA Language Models on Biologically Meaningful Tasks
  ☆127Updated last year
• kundajelab / tfmodisco
  TF MOtif Discovery from Importance SCOres
  ☆158Updated 3 weeks ago
• mheinzinger / SeqVec
  Modelling the Language of Life - Deep Learning Protein Sequences
  ☆74Updated 4 years ago
• rezacsedu / XAI-for-bioinformatics
  Explainable AI for Bioinformatics
  ☆126Updated 2 years ago
• ML-Bioinfo-CEITEC / genomic_benchmarks
  Benchmarks for classification of genomic sequences
  ☆164Updated 3 months ago
• ViennaRNA / ViennaRNA
  The ViennaRNA Package
  ☆371Updated 4 months ago
• calico / borzoi
  RNA-seq prediction with deep convolutional neural networks.
  ☆206Updated 3 months ago
• songlab-cal / gpn
  Genomic Pre-trained Network
  ☆309Updated last week
• nanoporetech / bonito
  A PyTorch Basecaller for Oxford Nanopore Reads
  ☆427Updated 2 weeks ago
• jmschrei / ledidi
  Ledidi turns any machine learning model into a biological sequence editor, allowing you to design sequences with desired properties.
  ☆95Updated 5 months ago
• co9olguy / Generating-and-designing-DNA
  Code for the paper "Generating and designing DNA with deep generative models" (arXiv:1712.06148)
  ☆42Updated 7 years ago
• BIMSBbioinfo / janggu
  Deep learning infrastructure for genomics
  ☆257Updated 4 years ago
• Bonidia / MathFeature
  Feature Extraction Package for Biological Sequences
  ☆65Updated 3 weeks ago
• brianhie / viral-mutation
  Language modeling of viral evolution
  ☆147Updated 2 years ago
• nadavbra / protein_bert
  ☆561Updated 7 months ago