Alternatives and similar repositories for phylotaR:

Users that are interested in phylotaR are comparing it to the libraries listed below

• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆14Updated 6 years ago
• shaunpwilkinson / insect
  Informatic Sequence Classification Trees
  ☆14Updated 3 years ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆22Updated 2 years ago
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆44Updated 2 weeks ago
• heibl / ips
  R Interfaces to Phylogenetic Software
  ☆11Updated 9 months ago
• TGuillerme / mulTree
  Performs MCMCglmm on multiple phylogenetic trees
  ☆12Updated 11 months ago
• ropensci / chromer
  package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/
  ☆12Updated 10 months ago
• leffj / mctoolsr
  Microbial community analysis tools in R
  ☆20Updated 2 years ago
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 3 years ago
• mblstamps / stamps2018
  STAMPS 2018 course
  ☆16Updated 6 years ago
• lamho86 / phylolm
  ☆33Updated 3 months ago
• mwpennell / geiger-v2
  A suite of methods and models for studying evolutionary radiations
  ☆22Updated last year
• grunwaldlab / analysis_of_microbiome_community_data_in_r
  This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://gr…
  ☆17Updated last year
• fmichonneau / phylobase
  An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data
  ☆18Updated last year
• ropensci / beastier
  R package to run BEAST2
  ☆11Updated 2 weeks ago
• ropensci / onekp
  Access sequences from the 1000 Plant Initiative (1KP)
  ☆13Updated last year
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• hmorlon / PANDA
  Phylogenetic ANalyses of DiversificAtion
  ☆24Updated last month
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆68Updated 8 months ago
• fkeck / phylosignal
  Exploring the Phylogenetic Signal in Continuous Traits
  ☆16Updated last year
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆35Updated 5 years ago
• bomeara / ComparativeMethodsInR
  A book for teaching people how to do comparative methods in R
  ☆20Updated last year
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆54Updated 6 months ago
• alexkychen / assignPOP
  Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…
  ☆17Updated 11 months ago
• skembel / picante
  R tools for integrating phylogenies and ecology
  ☆33Updated last year
• itsmisterbrown / microfiltR
  accessory functions for processing microbial community data
  ☆12Updated 2 years ago
• ropensci / beautier
  R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2
  ☆13Updated 2 weeks ago
• statdivlab / stamps2019
  statdivlab's teaching materials for STAMPS @ the MBL in 2019
  ☆12Updated 5 years ago
• lukejharmon / pcm
  A textbook for phylogenetic comparative methods.
  ☆43Updated 5 years ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆17Updated 6 years ago