scossin / IAMsystem
A fast dictionary-based approach for semantic annotation with approximate string matching algorithms
☆15Updated last year
Alternatives and similar repositories for IAMsystem:
Users that are interested in IAMsystem are comparing it to the libraries listed below
- FastContext is an optimized Java implementation of ConText algorithm (https://www.ncbi.nlm.nih.gov/pubmed/23920642).☆11Updated 3 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆64Updated 3 months ago
- A near real-time named-entity recognizer☆59Updated 8 months ago
- New approach to use Snomed-CT Concept using Word Embedding with Word2vec☆20Updated 5 years ago
- Living database of randomized controlled trials (RCTs)☆20Updated 2 years ago
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆99Updated 9 months ago
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…☆85Updated 5 months ago
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- ☆64Updated 3 years ago
- Semantic query and text mining tool☆22Updated last year
- UIMA CAS processing library written in Python☆86Updated 9 months ago
- ETUDE (Evaluation Tool for Unstructured Data and Extractions) is a Python-based tool that provides consistent evaluation options across a…☆12Updated 2 years ago
- Running MedCAT as a RESTful web service☆19Updated last week
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆79Updated this week
- Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.☆120Updated this week
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- A Serverless Text Annotation Tool for Corpus Development☆56Updated this week
- A Python library for performing NLP on clinical text written in Dutch☆35Updated 3 months ago
- Apache cTAKES is a Natural Language Processing (NLP) platform for clinical text.☆57Updated 2 weeks ago
- The official SNOMED CT OWL Toolkit. OWL conversion, classification and authoring support.☆100Updated last month
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆30Updated 9 months ago
- init☆12Updated 2 months ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 2 years ago
- Annotator building tool for Jupyter☆21Updated last year
- An implementation of the SNOMED CT Expression Constraint Language.☆27Updated last month
- ☆17Updated 10 months ago
- Weakly supervised medical named entity classification☆70Updated 2 years ago
- SKR Web API: Python implementation☆40Updated last year
- This repository contains a corpus of medical case reports with entity and relation annotations in BioC format.☆17Updated 5 years ago