percevalw / metannoLinks
Annotator building tool for Jupyter
☆22Updated 3 months ago
Alternatives and similar repositories for metanno
Users that are interested in metanno are comparing it to the libraries listed below
Sorting:
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆40Updated 5 months ago
- Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.☆124Updated this week
- EDS-Pseudo is a hybrid model for detecting personally identifying entities in clinical reports☆52Updated last month
- Natural language structuring library☆20Updated last year
- ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization☆27Updated 5 months ago
- This repository is now archived. Further development has been moved to https://github.com/medkit-lib/medkit.☆23Updated last year
- PyTorch extension for handling deeply nested sequences of variable length☆10Updated this week
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆68Updated last month
- ETUDE (Evaluation Tool for Unstructured Data and Extractions) is a Python-based tool that provides consistent evaluation options across a…☆12Updated 2 years ago
- A Serverless Text Annotation Tool for Corpus Development☆56Updated 3 months ago
- Health Data Metrics (HDM) a Data Quality assessment Application.☆12Updated 2 years ago
- ☆98Updated last year
- Benchmark Datasets for BioNLP Tasks☆13Updated last month
- A near real-time named-entity recognizer☆60Updated last year
- Python wraper for MetaMap☆174Updated 4 years ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- Part of the Cohort360 Project @ https://github.com/aphp/Cohort360, backend of the Cohort360 web app @ https://github.com/aphp/Cohort360-F…☆5Updated last week
- EDS-PDF is a generic, pure-Python framework for text extraction from PDF documents. It provides the machinery to use rule- or machine-lea…☆48Updated 3 months ago
- A Python library for performing NLP on clinical text written in Dutch☆35Updated 6 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆80Updated 2 weeks ago
- Confit is a complete and easy-to-use configuration framework aimed at improving the reproducibility of experiments by relying on the Pyth…☆11Updated last month
- Resourses of pre-trained word representations on clinical texts.☆12Updated 5 years ago
- ☆18Updated last year
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆67Updated 10 months ago
- ☆98Updated 3 years ago
- Sample code that demonstrates the use of the NCBO REST services☆44Updated last year
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆78Updated last week
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated last year