umcu / clinlp

Related projects ⓘ

Alternatives and complementary repositories for clinlp

• vmenger / deduce
  Deduce: de-identification method for Dutch medical text
  ☆52Updated 2 weeks ago
• asreview / synergy-dataset
  SYNERGY - Open machine learning dataset on study selection in systematic reviews
  ☆63Updated last year
• hpi-dhc / xmen
  ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization
  ☆23Updated 2 weeks ago
• kdpsingh / clinspacy
  Clinical Natural Language Processing using spaCy, scispacy, and medspacy
  ☆96Updated 6 months ago
• aphp / eds-scikit
  eds-scikit is a Python library providing tools to process and analyse OMOP data
  ☆36Updated 4 months ago
• aphp / edsnlp
  Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.
  ☆115Updated this week
• percevalw / metanno
  Annotator building tool for Jupyter
  ☆21Updated 9 months ago
• som-shahlab / trove
  Weakly supervised medical named entity classification
  ☆70Updated last year
• TeamHeka / medkit
  This repository is now archived. Further development has been moved to https://github.com/medkit-lib/medkit.
  ☆24Updated last year
• asreview / asreview-makita
  Workflow generator for simulation studies using the command line interface of ASReview LAB
  ☆31Updated 2 weeks ago
• asreview / asreview-insights
  Tools such as plots and metrics to analyze (simulated) reviews for ASReview LAB
  ☆28Updated 3 weeks ago
• cltl-students / verkijk_stella_rma_thesis_dutch_medical_language_model
  ☆10Updated 2 months ago
• medspacy / medspacy
  Library for clinical NLP with spaCy.
  ☆535Updated 3 weeks ago
• percevalw / nlstruct
  Natural language structuring library
  ☆19Updated 5 months ago
• OHNLP / MedTagger
  MedTagger is a light weight clinical NLP system built upon Apache UIMA.
  ☆64Updated this week
• MIT-LCP / mimic-omop
  Mapping the MIMIC-III database to the OMOP schema
  ☆128Updated 8 months ago
• OHDSI / Criteria2Query
  [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…
  ☆64Updated 3 months ago
• asreview / asreview-covid19
  Extension that adds Covid-19 related datasets to ASReview
  ☆27Updated 2 years ago
• asreview / template-extension-new-model
  Template repository to extend ASReview with a new model easily.
  ☆17Updated last year
• reality / komenti
  Semantic query and text mining tool
  ☆22Updated last year
• OHDSI / MIMIC
  MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…
  ☆71Updated last year
• ijmarshall / trialstreamer
  Living database of randomized controlled trials (RCTs)
  ☆18Updated 2 years ago
• hltfbk / E3C-Corpus
  E3C is a freely available multilingual corpus (Italian, English, French, Spanish, and Basque) of semantically annotated clinical narrativ…
  ☆24Updated 10 months ago
• OHNLP / N3C-NLP-Documentation
  Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019
  ☆21Updated last year
• kormilitzin / med7
  ☆204Updated 2 years ago
• jianlins / PyRuSH
  init
  ☆11Updated 2 months ago
• mghassem / medicationCategories
  Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…
  ☆27Updated 7 years ago
• BCHSI / philter-ucsf
  Open source clinical text de-identification
  ☆112Updated 3 months ago
• asreview / asreview-wordcloud
  ASReview extension to generate wordcloud from data files.
  ☆15Updated last year
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆104Updated last year