Alternatives and similar repositories for Llamanade

Users that are interested in Llamanade are comparing it to the libraries listed below

• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆53Updated last month
• AbSciBio / igdesign
  ☆46Updated 8 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆66Updated 2 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆84Updated 3 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆28Updated last year
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• AmeyaHarmalkar / therML
  The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability
  ☆13Updated 2 years ago
• regeneron-mpds / propermab
  ☆35Updated 5 months ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆23Updated last year
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 2 months ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆54Updated last week
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆66Updated 10 months ago
• BEAM-Labs / BALM
  Inference code for Bio-Inspired Antibody Language Model
  ☆25Updated last year
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆41Updated 4 years ago
• drhicks / Kejia_peptide_binders
  code for IDR binding paper 2025
  ☆53Updated 7 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆64Updated last year
• dina-lab3D / CombFold
  ☆86Updated last year
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆33Updated 7 years ago
• Kuhlman-Lab / evopro
  ☆87Updated last month
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆36Updated 2 years ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆82Updated last year
• Jfeldman34 / AF3Complex
  ☆45Updated 3 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆57Updated last week
• dahjan / DMS_opt
  ☆72Updated 5 years ago
• oxpig / SPACE2
  Tool for rapid clustering of antibody models by the structure of their CDRs.
  ☆23Updated 2 months ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 2 years ago
• SLx64 / af3cli
  A command-line interface and Python library for generating AlphaFold3 input files.
  ☆36Updated 3 months ago
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 10 months ago
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆93Updated this week