sangzhe / LlamanadeLinks
☆18Updated 2 years ago
Alternatives and similar repositories for Llamanade
Users that are interested in Llamanade are comparing it to the libraries listed below
Sorting:
- AlphaFold-initiated replica exchange protein docking☆83Updated 2 months ago
- ☆51Updated last week
- ☆43Updated 7 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆31Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆63Updated 3 weeks ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- ☆70Updated 4 years ago
- ☆41Updated last month
- AlphaBind code + model accompanying pre-print☆70Updated 2 weeks ago
- Tool for modelling the CDRs of antibodies☆50Updated 2 years ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆25Updated 2 years ago
- Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model☆24Updated 8 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆63Updated 8 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆60Updated last year
- ☆47Updated last year
- ☆86Updated last week
- Tool for rapid clustering of antibody models by the structure of their CDRs.☆23Updated 3 weeks ago
- PyDock Tutorial☆33Updated 7 years ago
- Inference code for Bio-Inspired Antibody Language Model☆25Updated 11 months ago
- Efficient manipulation of protein structures in Python☆55Updated 9 months ago
- ☆32Updated 4 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated last year
- ☆21Updated 6 years ago
- ANTIPASTI (ANTIbody Predictor of Affinity from STructural Information) is a Deep Learning model that predicts the binding affinity of ant…☆30Updated 9 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- code for IDR binding paper 2025☆43Updated 5 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆27Updated last year
- ☆85Updated 10 months ago
- Set of useful HADDOCK utility scripts☆53Updated 11 months ago
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆20Updated last year