R Package for individual based epidemiological models
☆34Aug 12, 2025Updated 9 months ago
Alternatives and similar repositories for individual
Users that are interested in individual are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An R package for Bayes Linear emulation and history matching.☆18Dec 1, 2025Updated 5 months ago
- A cookbook of epidemiological models☆13Mar 1, 2019Updated 7 years ago
- ᚩ A DSL for describing and solving differential equations in R☆106Jan 15, 2026Updated 4 months ago
- Analysing epidemic trends using AutoML approaches.☆20Apr 23, 2021Updated 5 years ago
- ☆29Jun 16, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)☆10Jul 11, 2025Updated 10 months ago
- Source files for building the IDM EMOD disease transmission model.☆106May 14, 2026Updated last week
- Support for the DIDE cluster☆10Nov 22, 2024Updated last year
- Applied category theory applied to epidemiological models☆12Aug 7, 2024Updated last year
- The malaria model☆21May 6, 2026Updated 2 weeks ago
- Helper functions for using mgcv☆12Oct 10, 2019Updated 6 years ago
- Compute and visualise incidence (reworking of the original incidence package)☆17Mar 25, 2026Updated last month
- Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic☆17Feb 13, 2025Updated last year
- Estimate epidemiological delay distributions with brms☆15Apr 13, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Dec 9, 2023Updated 2 years ago
- Grouped dates in R☆21Mar 25, 2026Updated last month
- Excess deaths due to COVID-19 pandemic in 2020☆11Jan 27, 2022Updated 4 years ago
- SEIR transmission model of COVID-19. Documentation at:☆53Feb 15, 2024Updated 2 years ago
- Course on nowcasting and forecasting of infectious disease dynamics☆24May 11, 2026Updated last week
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 7 months ago
- Simulating Plasmodium Epidemiological and Genetic Data☆12Apr 3, 2023Updated 3 years ago
- Monte-Carlo State Space Models☆19Jul 1, 2024Updated last year
- A tutorial on time series regression in environmental epidemiology☆11Apr 15, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Infectious disease model library and utilities☆16Sep 2, 2022Updated 3 years ago
- ☆27Feb 25, 2021Updated 5 years ago
- R package mixmeta☆14Oct 24, 2025Updated 7 months ago
- R package for easier interactions with the Go.Data API☆13May 15, 2023Updated 3 years ago
- R package for interface to MARK for mark-recapture data analysis☆20Updated this week
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆137Updated this week
- A collection of functions with emphasis on multivariate methods and handling of geographic datasets☆39Dec 4, 2025Updated 5 months ago
- Bayesian inference for dynamical models of biological systems in R☆17Nov 16, 2022Updated 3 years ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Aug 31, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A framework for data-driven stochastic disease spread simulations☆37May 16, 2026Updated last week
- A methodological framework for health impact projections under climate change scenarios☆14Apr 16, 2025Updated last year
- Survival modelling via ODEs☆11Apr 13, 2026Updated last month
- Create Contact Matrices from Population Data☆21Feb 24, 2026Updated 3 months ago
- ☆10Feb 9, 2026Updated 3 months ago
- opinion piece on discretization and multimodel averaging in ecological statistics☆25Jun 4, 2024Updated last year
- Data and forecast submission repository for the 2023 CDC West Nile virus Forecasting Challenge☆11Oct 30, 2023Updated 2 years ago