Alternatives and similar repositories for container:

Users that are interested in container are comparing it to the libraries listed below

• biocypher / clinical-knowledge-graph
  ☆14Updated 9 months ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆46Updated this week
• bio2bel / bio2bel
  A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
  ☆21Updated 3 years ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• phenopackets / phenopacket-tools
  An app and library for building, conversion, and validation of GA4GH Phenopackets.
  ☆13Updated last year
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆52Updated last month
• EBISPOT / EFO-UKB-mappings
  ☆13Updated 5 years ago
• esacinc / PDC-Public
  The public repository for the Proteomic Data Commons UI and APIs
  ☆14Updated 10 months ago
• reactome / reactome2py
  python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
  ☆28Updated last year
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• VariantEffect / mavehgvs
  A specification and Python implementation for representing variants from Multiplexed Assays of Variant Effect.
  ☆11Updated 3 months ago
• research-software-ecosystem / content
  A metadata commons to store research software metadata
  ☆41Updated this week
• biothings / mychem.info
  MyChem.info: A BioThings API for chemical/drug annotations
  ☆16Updated last week
• opentargets / OnToma
  Map your disease and phenotype terms to the Open Targets platform ontology
  ☆21Updated 4 months ago
• nmdp-bioinformatics / dash
  Data Standards Hackathon for NGS based typing.
  ☆13Updated last month
• WGLab / EHR-Phenolyzer
  A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list
  ☆36Updated last year
• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 4 years ago
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆57Updated last week
• benchling / integration-examples
  Example usage of the Benchling API: https://docs.benchling.com/
  ☆32Updated last year
• IEDB / ONTIE
  Ontology for Immune Epitopes
  ☆13Updated 2 months ago
• AstraZeneca / detectIS
  A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data
  ☆12Updated last year
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆24Updated 7 months ago
• dhimmel / clintrials
  Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov
  ☆27Updated 8 years ago
• cancervariants / metakb
  Central repository for the VICC metakb web application
  ☆15Updated 2 weeks ago
• monarch-initiative / monarchr
  R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.
  ☆14Updated 3 weeks ago
• biocommons / bioutils
  provides common tools and lookup tables used primarily by the hgvs and uta packages
  ☆22Updated 3 weeks ago
• CNAG-Biomedical-Informatics / convert-pheno
  A software toolkit for the interconversion of standard data models for phenotypic data
  ☆12Updated this week
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆64Updated 2 years ago
• jakelever / pgxmine
  Text mining for pharmacogenomic associations for PharmGKB
  ☆26Updated 2 years ago
• phenopackets / phenopacket-schema
  Repository for the GA4GH phenopacket schema
  ☆84Updated 6 months ago