esacinc / PDC-PublicLinks
The public repository for the Proteomic Data Commons UI and APIs
☆16Updated last year
Alternatives and similar repositories for PDC-Public
Users that are interested in PDC-Public are comparing it to the libraries listed below
Sorting:
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆27Updated 6 months ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Updated 2 weeks ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- A resource of adverse drug effects extracted from FDA structured product labels☆81Updated 2 months ago
- Python client for the Open Targets REST API at targetvalidation.org☆25Updated this week
- ☆64Updated last year
- Connect the dots in networks.☆19Updated 5 years ago
- Comprehensive Python client for the Uniprot REST API☆51Updated 2 months ago
- ☆11Updated 5 years ago
- A Python interface to proteomics data repositories☆34Updated 2 months ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 4 years ago
- Javascript package for embedding sequence logos☆15Updated 2 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Updated last year
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- ☆14Updated 6 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆23Updated 2 months ago
- Deep learning model to predict degron sequences☆19Updated 2 years ago
- Python package to load and query ARCHS4 data☆23Updated last month
- code for Gogleva et al manuscript☆45Updated 2 years ago
- Functional Embedding of Gene Signatures☆46Updated last year
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆18Updated 5 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- A BioJS viewer for protein sequence features☆51Updated 2 years ago
- Library of Integrated Cellular Signatures L1000☆31Updated 3 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Updated 2 years ago
- Example usage of the Benchling API: https://docs.benchling.com/☆35Updated 2 months ago
- ☆38Updated last year
- A collection of useful functions for bioinformatics data analysis☆24Updated last month