Control PyMOL sessions via IPython
☆61Nov 3, 2022Updated 3 years ago
Alternatives and similar repositories for ipymol
Users that are interested in ipymol are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Container-based installation of pymol, with interaction through the browser via Jupyter notebook☆20May 22, 2019Updated 7 years ago
- Various tutorials about MD setup and analysis, protein-ligand docking, machine learning and lots of other interesting things.☆35Jan 2, 2021Updated 5 years ago
- ☆32Apr 18, 2025Updated last year
- University of Groningen PhD thesis template☆17Apr 6, 2022Updated 4 years ago
- Python implementation of the Ramachandran plot☆57Jul 20, 2025Updated 10 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A collection of useful tutorials for Protein Science☆109Jun 29, 2015Updated 10 years ago
- Pymol ScrIpt COllection (PSICO)☆65Mar 13, 2026Updated 2 months ago
- Demos of many Rosetta applications☆25Jun 10, 2025Updated 11 months ago
- ☆140Aug 9, 2016Updated 9 years ago
- Code and resources for the EPSRC BioSimSpace project.☆78Sep 1, 2025Updated 8 months ago
- ☆16Oct 3, 2023Updated 2 years ago
- Automated omics-scale protein modeling and simulation setup.☆53Sep 20, 2021Updated 4 years ago
- Visualize structure data from Biotite with PyMOL☆26Mar 16, 2025Updated last year
- Collected scripts for Pymol☆525Mar 1, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- 2D and 3D molecular visualization in Jupyter notebooks using 3DMol.js and D3.js☆86Mar 30, 2018Updated 8 years ago
- Software for the analysis and visualization of site-saturation mutagenesis experiments☆19Apr 21, 2023Updated 3 years ago
- Cluster up to millions of peptide sequences on shared sequence motifs.☆13Oct 1, 2018Updated 7 years ago
- A Python API for the RCSB Protein Data Bank (PDB)☆336May 11, 2026Updated last week
- Template-directed automatic generation of transition state structures.☆11Nov 22, 2016Updated 9 years ago
- Sire Molecular Simulations Framework☆97Jul 17, 2023Updated 2 years ago
- Python interface of cpptraj☆191Mar 6, 2026Updated 2 months ago
- Tautomer ratios in solution☆28Sep 20, 2021Updated 4 years ago
- The App Store for VMD extensions.☆14Jan 14, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Generate Ramachandran plots for single PDB structure and as heatmap for MD trajectory☆11Apr 6, 2022Updated 4 years ago
- Some ideas on methods for comparing classification models☆10May 17, 2020Updated 6 years ago
- bakerlab pymol scripts☆26Feb 6, 2020Updated 6 years ago
- ☆25Oct 30, 2020Updated 5 years ago
- Protein and nucleic acid validation service☆97Mar 7, 2024Updated 2 years ago
- Molecular Query Language☆34Jun 24, 2024Updated last year
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Aug 29, 2023Updated 2 years ago
- Full automation of relative protein-ligand binding free energy calculations in GROMACS☆46May 3, 2021Updated 5 years ago
- docking visualization with py3dmol and streamlit☆25Mar 15, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- AlphaFold-initiated replica exchange protein docking☆91Jun 5, 2025Updated 11 months ago
- An open library for the analysis of molecular dynamics trajectories☆716May 4, 2026Updated 2 weeks ago
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆15Sep 24, 2022Updated 3 years ago
- ipywidgets GUI elements for HyperSpy☆11May 1, 2026Updated 3 weeks ago
- 2018 RDKit UGM☆14Sep 28, 2018Updated 7 years ago
- Jupyter widget to interactively view molecular structures and trajectories☆922Feb 2, 2026Updated 3 months ago
- ☆20Oct 4, 2022Updated 3 years ago