larsyunker / PythoMS
A series of python scripts which aid in the processing and interpretation of mass spectrometric data (formerly Mass-Spec-Python-Tools)
☆36Updated 4 years ago
Alternatives and similar repositories for PythoMS:
Users that are interested in PythoMS are comparing it to the libraries listed below
- A small library to provide peak picking for software processing mass spectrometry data☆21Updated 4 months ago
- ☆24Updated last year
- ☆23Updated 2 weeks ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆21Updated 2 months ago
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 9 months ago
- ☆32Updated 3 months ago
- ☆32Updated last month
- A Python wrapper for the Chemistry Development Kit (CDK)☆32Updated 5 years ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆32Updated 3 years ago
- PyMassSpec extension for searching mass spectra using NIST's Mass Spectrum Search Engine.☆20Updated 2 months ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 8 months ago
- CoreMS is a comprehensive mass spectrometry software framework☆57Updated this week
- Plotting mass spectra with Matplotlib☆32Updated 8 years ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆28Updated 3 weeks ago
- Python notebooks for teaching analytical chemistry☆13Updated 4 years ago
- A python client for the ClassyFire API☆16Updated 4 years ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆60Updated last month
- ☆17Updated 11 months ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆28Updated 3 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated 2 weeks ago
- Ultra-fast and Accurate Spectrum Matching☆27Updated last year
- The Multiplierz Proteomics Library☆24Updated 11 months ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆14Updated last year
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Updated last month
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆20Updated 2 months ago
- ECCpy is a program for EC50 calculation in python.☆44Updated last year
- Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…☆29Updated this week
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆29Updated last year
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆43Updated 3 weeks ago
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆17Updated last year