Alternatives and similar repositories for quantable

Users that are interested in quantable are comparing it to the libraries listed below

• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆43Updated last week
• csoneson / countsimQC
  countsimQC - Compare characteristic features of count data sets
  ☆29Updated this week
• tmuetze / Bioconductor_RCy3_the_new_RCytoscape
  Update RCytoscape to work for Cytoscape 3.0 and higher using CyREST
  ☆16Updated 7 years ago
• Bohdan-Khomtchouk / shinyheatmap
  Web application for enormous biological heatmaps
  ☆66Updated 5 years ago
• cmap / morpheus.R
  R interface to morpheus.js heatmap widget
  ☆38Updated 5 years ago
• bwlewis / 1000_genomes_examples
  Examples using R and 1000 genomes data
  ☆28Updated 4 years ago
• seandavi / wdlRunR
  Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
  ☆34Updated 4 years ago
• sarbal / EGAD
  Gene network analysis
  ☆19Updated 2 years ago
• nellore / runs
  Scripts for reproducing analyses of large RNA-seq datasets
  ☆15Updated 6 years ago
• StantonLabDartmouth / AppScanGEO
  Source code for ScanGEO Shiny App
  ☆15Updated 3 years ago
• mtmorgan / TENxGenomics
  Interface to 10x Genomics' 1.3 m single cell data set
  ☆18Updated 7 years ago
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago
• lgeistlinger / EnrichmentBrowser
  Seamless navigation through combined results of set-based and network-based enrichment analysis
  ☆21Updated last month
• lcolladotor / derfinder
  Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches
  ☆45Updated 10 months ago
• Bohdan-Khomtchouk / fastheatmap
  Super high performance interactive heatmap software
  ☆31Updated 6 years ago
• csoneson / iCOBRA
  Interactive benchmarking of ranking and assignment methods
  ☆16Updated 3 months ago
• UCLouvain-CBIO / WSBIM1322
  Bioinformatics course (WSBIM1322)
  ☆17Updated 2 weeks ago
• abbvie-external / OmicNavigator
  Open-Source Software for Omic Data Analysis and Visualization
  ☆40Updated last week
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 10 months ago
• brentp / 450k-analysis-guide
  A Practical (And Opinionated) Guide To Analyzing 450K Data
  ☆35Updated 11 years ago
• itsvenu / ALPS
  AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project
  ☆16Updated 2 years ago
• mararie / lionessR
  Single sample network reconstruction in R
  ☆23Updated 5 years ago
• stephenturner / kgp
  1000 Genomes Project Metadata R Package
  ☆20Updated this week
• StatGenPRD / STOPGAP
  Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…
  ☆11Updated 5 years ago
• zhengxwen / HIBAG
  R package – HLA Genotype Imputation with Attribute Bagging (development version only)
  ☆31Updated 5 months ago
• kharchenkolab / sccore
  Core utilities for single-cell RNA-seq
  ☆12Updated 6 months ago
• kwanjeeraw / metabox
  a toolbox for metabolomic data analysis, visualization and ‘omic’ integration
  ☆13Updated 7 years ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆31Updated 6 months ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 6 years ago
• friend1ws / pmsignature
  R package for extracting mutation signatures from a list of somatic mutations
  ☆37Updated 6 years ago