pcingola / BigDataScriptLinks
BigDataScript: Scirpting language for big data
☆92Updated 4 years ago
Alternatives and similar repositories for BigDataScript
Users that are interested in BigDataScript are comparing it to the libraries listed below
Sorting:
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- Deprecated☆101Updated 6 years ago
- workflow and resource management system for bioinformatics data analysis☆70Updated 5 years ago
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆68Updated 5 years ago
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago
- Mulled - Automatized Containerized Software Repository☆66Updated last year
- GenomicsDB☆109Updated 3 years ago
- New url: https://github.com/biointec/halvade☆19Updated 8 years ago
- SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis☆25Updated 10 years ago
- Python graph database framework for bioinformatics☆95Updated 4 years ago
- CloudBioLinux: configure virtual (or real) machines with tools for biological analyses☆257Updated 2 years ago
- Benchmarking toolkit for variant calling☆48Updated 5 years ago
- Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data☆297Updated 5 months ago
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆75Updated 8 years ago
- Bpipe - a tool for running and managing bioinformatics pipelines☆239Updated 2 months ago
- Quality control methods for human genomic variants.☆61Updated 3 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆70Updated 5 years ago
- Population Stratification Analysis on Genomics Data Using Deep Learning☆25Updated 9 years ago
- A scalable genome browser. Apache 2 licensed.☆126Updated 3 years ago
- Funnel is a toolkit for distributed task execution via a simple, standard API.☆134Updated this week
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆75Updated 5 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆99Updated 8 years ago
- [Bio in Docker] Symposium 2015☆21Updated 8 years ago
- This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster☆17Updated 7 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 5 years ago
- Easily create and manage compute clusters on any Cloud.☆37Updated last year
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 9 years ago
- Isaac Genome Alignment Software☆36Updated 10 years ago
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 9 years ago