pcingola / BigDataScriptLinks
BigDataScript: Scirpting language for big data
☆92Updated 4 years ago
Alternatives and similar repositories for BigDataScript
Users that are interested in BigDataScript are comparing it to the libraries listed below
Sorting:
- Deprecated☆100Updated 6 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- workflow and resource management system for bioinformatics data analysis☆69Updated 4 years ago
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆67Updated 5 years ago
- Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data☆294Updated last month
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆76Updated 8 years ago
- New url: https://github.com/biointec/halvade☆19Updated 8 years ago
- Bpipe - a tool for running and managing bioinformatics pipelines☆239Updated last week
- GenomicsDB☆110Updated 2 years ago
- Benchmarking toolkit for variant calling☆48Updated 4 years ago
- Mulled - Automatized Containerized Software Repository☆66Updated last year
- DNAnexus platform client libraries☆100Updated last week
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆75Updated 4 years ago
- A scalable genome browser. Apache 2 licensed.☆126Updated 2 years ago
- SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis☆25Updated 10 years ago
- Python graph database framework for bioinformatics☆94Updated 3 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- CloudBioLinux: configure virtual (or real) machines with tools for biological analyses☆257Updated last year
- ☆45Updated 9 years ago
- Isaac Genome Alignment Software☆36Updated 10 years ago
- Quality control methods for human genomic variants.☆62Updated 3 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 5 years ago
- CRAM format specification and java API for read data.☆60Updated 7 years ago
- [Bio in Docker] Symposium 2015☆21Updated 8 years ago
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆72Updated 2 years ago
- Fast and memory-efficient sequencing error corrector☆93Updated last year
- Funnel is a toolkit for distributed task execution via a simple, standard API.☆131Updated last week
- This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka☆37Updated 8 years ago
- Documentation for the Google Genomics cookbook.☆141Updated 5 years ago