oxpig / ANARCIILinks
A language model suite for numbering antigen receptor sequences.
☆36Updated 3 weeks ago
Alternatives and similar repositories for ANARCII
Users that are interested in ANARCII are comparing it to the libraries listed below
Sorting:
- ☆47Updated last year
- Code for holographic machine learning of proteins☆24Updated last year
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆55Updated 10 months ago
- ☆28Updated 5 months ago
- Tools for annotation, processing and ML for antibody sequences☆39Updated this week
- Structure prediction of alternative protein conformations☆80Updated 11 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆35Updated 2 months ago
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆99Updated last month
- Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…☆22Updated 2 years ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆60Updated last week
- An antibody-specific language model focusing on NGL prediction☆36Updated last year
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆23Updated last year
- ☆41Updated 5 months ago
- Tool for modelling the CDRs of antibodies☆50Updated 3 years ago
- ☆74Updated 10 months ago
- One protein is all you need (ICLR 2026)☆67Updated last month
- The DSSP building software☆50Updated 2 years ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 10 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…☆63Updated 3 months ago
- Efficient manipulation of protein structures in Python☆63Updated 4 months ago
- An antibody-specific language model focusing on NGL prediction☆25Updated 11 months ago
- Humanness of de-novo designed proteins☆39Updated 8 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆117Updated 6 months ago
- Learning the language of protein-protein interactions☆131Updated 3 weeks ago
- Fragment binding prediction with ColabFold☆41Updated 3 months ago
- ☆56Updated 5 months ago
- Machine learning-driven antibody design☆63Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Updated last year
- ☆74Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆45Updated 3 years ago