oxpig / ANARCIILinks
A language model suite for numbering antigen receptor sequences.
☆27Updated last week
Alternatives and similar repositories for ANARCII
Users that are interested in ANARCII are comparing it to the libraries listed below
Sorting:
- Fragment binding prediction with ColabFold☆37Updated 7 months ago
- Code for designing biased protein states☆14Updated last week
- ☆25Updated 2 months ago
- ☆30Updated 5 months ago
- Independent evaluation set construction for trustworthy ML models in biochemistry☆16Updated last month
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Updated last year
- ☆47Updated 9 months ago
- AbBFN2: A flexible antibody foundation model based on Bayesian Flow Networks☆35Updated 4 months ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆58Updated 2 months ago
- Code for holographic machine learning of proteins☆24Updated last year
- Humanness of de-novo designed proteins☆29Updated 5 months ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆54Updated 6 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 7 months ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- Machine learning-driven antibody design☆60Updated 2 years ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆23Updated last year
- Tool for modelling the CDRs of antibodies☆32Updated 2 years ago
- Structure prediction of alternative protein conformations☆80Updated 8 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- This repository contains the stand-alone tool for MusiteDeep server☆34Updated 4 years ago
- PyPEF – Pythonic Protein Engineering Framework☆24Updated last month
- ☆35Updated 3 weeks ago
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆24Updated last year
- Implementation code for the paper "Aggregating Residue-Level Protein Language Model Embeddings with Optimal Transport"☆21Updated 5 months ago
- EvolveX, a de novo antibody computational design pipeline.☆12Updated last month
- The DSSP building software☆47Updated 2 years ago
- Python package to atom map, correct and suggest enzymatic reactions☆39Updated last year
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆25Updated last year
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆12Updated last year