qazwsxal / diffusion-extensionsLinks
Reference implmentation of Diffusion models on SO(3)
☆31Updated 3 years ago
Alternatives and similar repositories for diffusion-extensions
Users that are interested in diffusion-extensions are comparing it to the libraries listed below
Sorting:
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆269Updated last year
- ☆37Updated last year
- ☆35Updated 3 years ago
- ☆59Updated 3 years ago
- [ICLR 2022] The implementation for the paper "Equivariant Graph Mechanics Networks with Constraints".☆63Updated last year
- This Denoising Force Field (DFF) codebase provides a Pytorch framework for the method presented in Two for one: Diffusion models and forc…☆66Updated last year
- [ICLR 2024] "Latent 3D Graph Diffusion" by Yuning You, Ruida Zhou, Jiwoong Park, Haotian Xu, Chao Tian, Zhangyang Wang, Yang Shen☆53Updated last year
- MiDi: Mixed Graph and 3D Denoising Diffusion for Molecule Generation☆108Updated last year
- E(3) Steerable Graph Neural Network☆125Updated 2 years ago
- Code for the paper Iterated Denoising Energy Matching for Sampling from Boltzmann Densities.☆67Updated 8 months ago
- Implementation for NeurIPS 2023 paper "Equivariant Flow Matching with Hybrid Probability Transport for 3D Molecule Generation"☆39Updated last year
- ☆26Updated last year
- Score-based generative models for compact manifolds☆116Updated last year
- Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequ…☆89Updated 3 years ago
- Implementation of "Denoise Pretraining on Non-equilibrium Molecular Conformations for Accurate and Transferable Neural Potentials" in PyT…☆14Updated 2 years ago
- Lagrangian formulation of Doob's h-transform allowing for efficient rare event sampling☆54Updated 8 months ago
- Code for "Biological Sequence Design with GFlowNets", 2022☆75Updated 2 years ago
- Source code for Equivariant Flow Matching for Molecular Conformer Generation☆52Updated 4 months ago
- Learning Joint 2D & 3D Diffusion Models for Complete Molecule Generation☆51Updated 2 years ago
- ☆27Updated last year
- Official implementation of "Generating 3D Molecules for Target Protein Binding" [ICML2022 Long Presentation]☆109Updated 2 years ago
- [NeurIPS 2025 spotlight] Efficient factorized variant of the IPA module.☆36Updated 3 weeks ago
- This is the official implementation for Equivariant Enengy-guided SDE for Inverse Molecule Design (ICLR 2023)☆48Updated 2 years ago
- [TMLR 2023] Simulate time-integrated coarse-grained MD with multi-scale graph neural networks☆72Updated 2 years ago
- Geometric Latent Diffusion Models for 3D Molecule Generation☆265Updated 2 years ago
- Implementation of the Equiformer, SE3/E3 equivariant attention network that reaches new SOTA, and adopted for use by EquiFold for protein…☆283Updated 11 months ago
- ☆34Updated 7 months ago
- SE(3) Equivariant Augmented Coupling Flows. NeurIPS 2023.☆24Updated last year
- ☆34Updated 9 months ago
- Implementation of ICML2023 paper : Coarse-to-Fine: a Hierarchical Diffusion Model for Molecule Generation in 3D☆50Updated 2 years ago