i2b2-omop / i2o-transform
PCORnet Ontology to OMOP - beta!
☆11Updated last year
Alternatives and similar repositories for i2o-transform:
Users that are interested in i2o-transform are comparing it to the libraries listed below
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆86Updated last year
- ☆25Updated 2 weeks ago
- ☆26Updated 6 years ago
- Data Ingestion and Harmonization☆43Updated 2 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆23Updated 3 years ago
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆14Updated 4 years ago
- loinc2hpo Annotation Data☆24Updated 2 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- Leaf Clinical Data Explorer☆90Updated 3 months ago
- Oncology Working Group Repository☆56Updated last week
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 3 months ago
- DQe-c is a tool for examining completeness in clinical research data repositories.☆8Updated 7 years ago
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆27Updated 3 years ago
- Repository for development of the genomic module of the CDM.☆20Updated 5 years ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆30Updated last year
- Main OMOPonFHIR Settings☆45Updated 3 years ago
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆30Updated 4 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆62Updated last year
- Pilot model and converter for integration of radiology data into OMOP-CDM☆22Updated 5 years ago
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆33Updated last year
- ☆14Updated last month
- ETL UK-Biobank☆13Updated 2 years ago
- vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration☆37Updated 5 months ago
- Medical action ontology☆55Updated last month
- Transform the OMOP model to graph model☆21Updated 2 months ago
- Course materials for OHDSI ETL tutorial☆45Updated 3 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆60Updated 4 months ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆50Updated last year