i2b2-omop / i2o-transformLinks
PCORnet Ontology to OMOP - beta!
☆11Updated last year
Alternatives and similar repositories for i2o-transform
Users that are interested in i2o-transform are comparing it to the libraries listed below
Sorting:
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆91Updated last year
- Leaf Clinical Data Explorer☆95Updated 5 months ago
- Oncology Working Group Repository☆57Updated this week
- ☆29Updated 7 years ago
- ☆25Updated 7 months ago
- Repository for development of the genomic module of the CDM.☆23Updated 6 years ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆53Updated 2 weeks ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆38Updated last year
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆64Updated 2 months ago
- Data Ingestion and Harmonization☆45Updated last week
- A package supporting the conversion from Synthea CSV to OMOP CDM☆115Updated 6 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆69Updated 3 weeks ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 3 weeks ago
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- ETL UK-Biobank☆16Updated 2 years ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated last year
- https://celehs.github.io/PheCAP/☆22Updated 4 years ago
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆100Updated last year
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆33Updated last year
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆31Updated last year
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆29Updated 4 years ago
- NCATS Biomedical Translator Reasoners Standard API☆37Updated 3 months ago
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 6 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆140Updated this week
- MASI Lab Implementation of PheWAS in Python☆28Updated 10 months ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆70Updated this week
- Map your disease and phenotype terms to the Open Targets platform ontology☆21Updated last week
- Pilot model and converter for integration of radiology data into OMOP-CDM☆23Updated 5 years ago