Alternatives and similar repositories for i2o-transform

Users that are interested in i2o-transform are comparing it to the libraries listed below

• callahantiff / OMOP2OBO
  OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
  ☆91Updated 2 years ago
• uwrit / leaf
  Leaf Clinical Data Explorer
  ☆97Updated 6 months ago
• National-Clinical-Cohort-Collaborative / Data-Ingestion-and-Harmonization
  Data Ingestion and Harmonization
  ☆45Updated 2 weeks ago
• NCTraCSIDSci / camp-fhir
  ☆25Updated 8 months ago
• OHDSI / OMOP-Queries
  ☆29Updated 7 years ago
• OHDSI / OncologyWG
  Oncology Working Group Repository
  ☆57Updated 3 weeks ago
• National-Clinical-Cohort-Collaborative / Phenotype_Data_Acquisition
  The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream
  ☆64Updated 3 months ago
• opentargets / OnToma
  Map your disease and phenotype terms to the Open Targets platform ontology
  ☆21Updated 2 weeks ago
• OHDSI / Athena
  Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM
  ☆70Updated last month
• NCATSTranslator / ReasonerAPI
  NCATS Biomedical Translator Reasoners Standard API
  ☆39Updated last week
• OHDSI / Perseus
  [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack
  ☆38Updated last year
• RTXteam / RTX
  Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
  ☆40Updated last week
• callahantiff / PheKnowLator
  PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
  ☆194Updated last year
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆60Updated last week
• OHDSI / ClinicalTrialsWGETL
  [under development] ETL materials to support proposal for CDM enhancements for clinical trial data
  ☆24Updated 4 years ago
• OHDSI / Genomic-CDM
  Repository for development of the genomic module of the CDM.
  ☆23Updated 6 years ago
• monarch-initiative / loinc2hpo
  Java library to map LOINC-encoded test results to Human Phenotype Ontology
  ☆32Updated last year
• EHDEN / ETL-UK-Biobank
  ETL UK-Biobank
  ☆16Updated 2 years ago
• OHDSI / ETL-CDMBuilder
  ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases
  ☆53Updated this week
• thepanacealab / OHDSIananke
  OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers
  ☆14Updated 5 years ago
• monarch-initiative / mondo
  Mondo Disease Ontology
  ☆272Updated this week
• OHDSI / Themis
  Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …
  ☆28Updated last month
• MASILab / pyPheWAS
  MASI Lab Implementation of PheWAS in Python
  ☆28Updated 10 months ago
• ga4gh / phenopacket-schema
  Repository for the GA4GH phenopacket schema
  ☆90Updated last week
• omoponfhir / omoponfhir-main
  Main OMOPonFHIR Settings
  ☆45Updated 3 years ago
• BenGlicksberg / PatientExploreR
  Dynamic visualization of Electronic Health Record data in the OMOP framework
  ☆29Updated 4 years ago
• elimuinformatics / vcf2fhir
  vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration
  ☆40Updated last year
• clinical-ai / omop-etl
  ETL Tool for converting datasets to OMOP CDM
  ☆33Updated 2 years ago
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆57Updated this week
• monarch-initiative / MAxO
  Medical action ontology
  ☆60Updated last month