i2b2-omop / i2o-transformLinks
PCORnet Ontology to OMOP - beta!
☆11Updated last year
Alternatives and similar repositories for i2o-transform
Users that are interested in i2o-transform are comparing it to the libraries listed below
Sorting:
- Data Ingestion and Harmonization☆44Updated last month
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆88Updated last year
- ☆25Updated 4 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 6 months ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 3 years ago
- Leaf Clinical Data Explorer☆91Updated 2 months ago
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆30Updated 5 years ago
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- Repository for development of the genomic module of the CDM.☆20Updated 5 years ago
- ☆27Updated 6 years ago
- Oncology Working Group Repository☆56Updated last week
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆61Updated 2 months ago
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆63Updated last week
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆36Updated last year
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆28Updated 4 years ago
- DQe-c is a tool for examining completeness in clinical research data repositories.☆8Updated 7 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- ☆15Updated 6 months ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆31Updated last year
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆29Updated this week
- An R package for evaluating phenotype algorithms.☆17Updated 7 months ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆43Updated last week
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated 11 months ago
- ☆12Updated 3 weeks ago
- ☆14Updated 3 months ago
- ETL Tool for converting datasets to OMOP CDM☆32Updated 2 years ago
- loinc2hpo Annotation Data☆24Updated 2 years ago
- Pilot model and converter for integration of radiology data into OMOP-CDM☆22Updated 5 years ago