PCORnet Ontology to OMOP - beta!
☆11Feb 7, 2024Updated 2 years ago
Alternatives and similar repositories for i2o-transform
Users that are interested in i2o-transform are comparing it to the libraries listed below
Sorting:
- Core code for Profiles RNS☆19Dec 18, 2025Updated 2 months ago
- ARCH i2b2 PCORnet Ontology☆14May 1, 2019Updated 6 years ago
- ☆25Feb 3, 2025Updated last year
- Leaf Clinical Data Explorer☆100Nov 3, 2025Updated 4 months ago
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆32Jun 1, 2020Updated 5 years ago
- ☆10Nov 15, 2015Updated 10 years ago
- Python library & CLI to create, view and edit PFB files☆12Feb 19, 2026Updated last week
- A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list☆37Jul 25, 2023Updated 2 years ago
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆44Dec 19, 2024Updated last year
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆44Dec 9, 2025Updated 2 months ago
- ☆14Feb 12, 2025Updated last year
- Updated LaTeX template for UNC dissertations based on Björn Brandenburg's template☆13May 12, 2020Updated 5 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 2 months ago
- [source] CELLO - Cancer EvoLution toolbox for LOngitudinal data☆17Aug 24, 2020Updated 5 years ago
- ☆12Nov 14, 2025Updated 3 months ago
- i2b2 server source code☆40Updated this week
- Corresponding code for experiments described in "Predicting Clinical Outcomes Across Changing Electronic Health Records." Presented at KD…☆11Sep 8, 2017Updated 8 years ago
- ☆10Jul 21, 2024Updated last year
- A Claude Skill for connecting to and analyzing personal health records via SMART on FHIR☆42Feb 13, 2026Updated 2 weeks ago
- HDR UK Schemas☆12Feb 5, 2024Updated 2 years ago
- An interactive web application tool that enables big data visualization of the 136k+ UK Road Accidents reported during 2016.☆10Oct 19, 2022Updated 3 years ago
- classification of higher-order structural variants from breakpoint data☆11Jan 8, 2018Updated 8 years ago
- Package to estimate the grouping loss of a classifier, based on the paper "Beyond calibration: estimating the grouping loss of modern neu…☆11Dec 14, 2024Updated last year
- Enhancing Document-level Relation Extraction by Entity Knowledge Injection, ISWC 2022☆14Jul 20, 2022Updated 3 years ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆12Jun 13, 2025Updated 8 months ago
- ☆10Jan 14, 2025Updated last year
- Jupyter Notebooks and other code for 4CE data visualizations.☆13Jan 25, 2023Updated 3 years ago
- The errata lists the minor errors and typos that have been identified in the PCORnet Common Data Model (CDM) specification.☆12Jun 21, 2019Updated 6 years ago
- ☆11Feb 12, 2026Updated 2 weeks ago
- A collaborative guidebook for reusable data best practices☆13Mar 5, 2023Updated 2 years ago
- Library for Microsoft Bot Framework Chatbot unit testing☆11Feb 26, 2019Updated 7 years ago
- ☆13May 3, 2022Updated 3 years ago
- Data.world load scripts☆12Sep 3, 2017Updated 8 years ago
- Yet Another SEquence Tagger☆10Dec 8, 2022Updated 3 years ago
- Denoising Autoencoders for Phenotype Stratification☆42Nov 9, 2018Updated 7 years ago
- Main OMOPonFHIR Settings☆47Feb 11, 2022Updated 4 years ago
- ☆16Feb 12, 2017Updated 9 years ago
- A python interface for the CIViC db application☆11Feb 19, 2026Updated last week
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago