fdechaumont / lmt-analysisLinks
Live Mouse Tracker analysis
☆33Updated last month
Alternatives and similar repositories for lmt-analysis
Users that are interested in lmt-analysis are comparing it to the libraries listed below
Sorting:
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated 2 weeks ago
- Segmentation of anatomical structures in a common coordinate space☆34Updated 2 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆61Updated 2 years ago
- ☆34Updated 6 months ago
- ☆52Updated last year
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated last year
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆23Updated 2 years ago
- Read and write files from the BrainGlobe neuroanatomy suite☆15Updated 2 weeks ago
- analysis tools for large-scale neural recordings☆16Updated 7 months ago
- Automated 3D brain registration with support for multiple species and atlases.☆138Updated 2 weeks ago
- Brainways☆21Updated 2 months ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆24Updated 2 weeks ago
- Loading and saving of image data.☆10Updated last year
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated last month
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Anatomical space conventions made easy.☆11Updated 2 weeks ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Browser-based NWB visualization and DANDI exploration☆60Updated last week
- brainglobe.info website☆11Updated last week
- ☆28Updated 3 weeks ago
- Napari plugin for working with video files.☆13Updated 2 months ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆60Updated last month
- ☆10Updated 2 years ago