fdechaumont / lmt-analysis
Live Mouse Tracker analysis
☆26Updated 2 weeks ago
Alternatives and similar repositories for lmt-analysis:
Users that are interested in lmt-analysis are comparing it to the libraries listed below
- Rendering anatomical heatmaps with brainrender and matplotlib☆34Updated this week
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆52Updated last year
- Segmentation of anatomical structures in a common coordinate space☆30Updated this week
- ☆51Updated 5 months ago
- ☆32Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 3 months ago
- Read and write files from the BrainGlobe neuroanatomy suite☆13Updated this week
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆24Updated 10 months ago
- ☆21Updated 5 months ago
- A tool to streamline extracellular electrophysiology analysis using SpikeInterface☆13Updated this week
- Loading and saving of image data.☆10Updated 11 months ago
- ☆25Updated 6 months ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated 3 months ago
- Brainways☆14Updated 2 weeks ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆15Updated last year
- Match suite2p ROIs between imaging sessions☆23Updated 5 years ago
- Histology processing☆65Updated 10 months ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated 10 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year
- Demo code for CAPTURE and DANNCE☆27Updated 3 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆24Updated last year
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆32Updated 3 years ago
- ☆19Updated 11 months ago
- Utility to create a basic Python project structure with tests, CI etc.☆24Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated last week
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆20Updated this week
- A modular package to control stimulation and track behaviour☆44Updated 2 months ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year
- Analyze neuroscience data in the cloud☆19Updated 4 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago