fdechaumont / lmt-analysisLinks
Live Mouse Tracker analysis
☆35Updated last week
Alternatives and similar repositories for lmt-analysis
Users that are interested in lmt-analysis are comparing it to the libraries listed below
Sorting:
- Rendering anatomical heatmaps with brainrender and matplotlib☆47Updated last week
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆62Updated 2 years ago
- Segmentation of anatomical structures in a common coordinate space☆35Updated last week
- Read and write files from the BrainGlobe neuroanatomy suite☆15Updated last week
- ☆34Updated 8 months ago
- Brainways☆22Updated 5 months ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆23Updated last week
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆31Updated 2 years ago
- analysis tools for large-scale neural recordings☆16Updated 10 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Anatomical space conventions made easy.☆12Updated last week
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆29Updated last week
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- ☆18Updated 4 years ago
- Loading and saving of image data.☆10Updated 2 years ago
- 3-D imaging visualisation through slicing☆31Updated last year
- ☆52Updated last year
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆41Updated last month
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆60Updated last week
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆20Updated last month
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆23Updated 2 years ago
- brainglobe.info website☆13Updated this week
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 5 years ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Updated 5 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- ☆29Updated 3 months ago
- Napari plugin for working with video files.☆13Updated 5 months ago
- GPU-based 3D non-rigid volumetric registration☆43Updated 5 months ago