Bunnybeibei / GexMolGenLinks
Cross-modal generation of molecules from gene expression inputs. (Briefings in Bioinformatics 2024)
☆11Updated 2 months ago
Alternatives and similar repositories for GexMolGen
Users that are interested in GexMolGen are comparing it to the libraries listed below
Sorting:
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- ☆49Updated last year
- a deep learning architecture for RNA-ligand binding sites prediction☆18Updated last year
- ☆86Updated 2 years ago
- ☆34Updated 2 years ago
- ☆31Updated last year
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆26Updated last year
- ☆69Updated 4 years ago
- A novel graph neural network strategy with the Vina distance optimization terms to predict protein-ligand binding affinity☆32Updated last year
- ☆48Updated 6 months ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆40Updated last year
- An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.☆52Updated 6 months ago
- Interpretable AI pipeline improving binding predictions for novel protein targets and ligands☆39Updated last year
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆49Updated last year
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated last year
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆45Updated 6 months ago
- Deep learning datasets for RNA 3D and 2.5D structures.☆40Updated this week
- Machine learning models for antibody sequences in PyTorch☆39Updated 4 years ago
- Official implementation for ActFound (Nature Machine Intelligence): A bioactivity foundation model using pairwise meta-learning☆42Updated 8 months ago
- ☆52Updated 11 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆113Updated 4 months ago
- ☆33Updated last year
- Pretrainable geometric graph neural network for antibody affinity maturation☆59Updated 3 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆56Updated 3 weeks ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆25Updated last year
- ☆63Updated 2 years ago
- Official repository of ReactZyme☆34Updated 9 months ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆39Updated last year
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆32Updated 2 years ago