multicom-toolbox / multicomLinks
The MULTICOM protein structure system. This repository includes the source code and documents of both template-based and template-free modeling of the MULTICOM protein structure prediction system. 1D feature prediction, contact prediction, and clustering-based model ranking programs are also included.
☆17Updated 3 years ago
Alternatives and similar repositories for multicom
Users that are interested in multicom are comparing it to the libraries listed below
Sorting:
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Updated 4 years ago
- Printing text using protein structures☆13Updated 4 years ago
- This repo contains the collection of codes to find designer interfacial mutations☆17Updated 2 years ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 3 years ago
- Protein common interface databases☆10Updated 6 years ago
- Web cards/apps describing peptides☆30Updated 2 years ago
- Fast and accurate protein structure prediction☆54Updated 8 months ago
- Pseudo Likelihood Maximization for protein in Julia☆51Updated 4 months ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated 2 years ago
- ☆22Updated 2 years ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆25Updated last year
- A wxPython graphical interface for the PyRosetta and Rosetta protein modeling suites☆29Updated 7 years ago
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆10Updated 5 years ago
- PCA and normal mode analysis of proteins☆18Updated last year
- Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)☆15Updated 11 months ago
- Python/TF1 implementation of DeepAccNet (https://www.biorxiv.org/content/10.1101/2020.07.17.209643v1)☆10Updated 5 years ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- ☆30Updated 4 months ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆29Updated last year
- Source code for the BUDE Alanine Scan web application.☆12Updated 3 months ago
- Pipeline for protein-protein interaction prediction☆23Updated 3 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆59Updated 5 months ago
- ProtT5 (Transformer) embeddings used for residue wise disorder prediction in proteins☆11Updated last year
- MEGADOCK on Google Colaboratory☆17Updated last year
- Non-sequential structural alignment program for protein structure☆19Updated 10 months ago
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Updated 3 years ago
- Python package to manage protein structures and their annotations☆44Updated last year
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆16Updated 9 months ago
- Protein-Protein Docking using Genetic Algorithm☆17Updated last year
- Foldy: a web-based platform for interactive protein structure analysis☆23Updated last month