multicom-toolbox / multicomLinks
The MULTICOM protein structure system. This repository includes the source code and documents of both template-based and template-free modeling of the MULTICOM protein structure prediction system. 1D feature prediction, contact prediction, and clustering-based model ranking programs are also included.
☆17Updated 3 years ago
Alternatives and similar repositories for multicom
Users that are interested in multicom are comparing it to the libraries listed below
Sorting:
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Updated 4 years ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆25Updated last year
- ☆9Updated 2 years ago
- This repo contains the collection of codes to find designer interfacial mutations☆17Updated last year
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 3 years ago
- Protein common interface databases☆10Updated 6 years ago
- Web cards/apps describing peptides☆29Updated 2 years ago
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Updated 3 years ago
- a toolbox for the manipulation, modelling and analysis of molecular structures☆27Updated 9 months ago
- ☆30Updated 2 months ago
- Screen interactions with AlphaFold Multimer☆11Updated 5 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Updated 11 months ago
- Printing text using protein structures☆13Updated 4 years ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆39Updated 2 years ago
- We introduce a differentiable approach to phylogenetic tree construction, optimizing tree and ancestral sequences in its original represe…☆20Updated last year
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 6 years ago
- ☆13Updated 5 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated 2 years ago
- Fast and accurate protein structure prediction☆53Updated 6 months ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆27Updated last year
- Python package to manage protein structures and their annotations☆43Updated last year
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆10Updated 4 years ago
- EvolveX, a de novo antibody computational design pipeline.☆12Updated 7 months ago
- ☆20Updated last year
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆16Updated 8 months ago
- ☆8Updated 6 years ago
- ☆22Updated 2 years ago
- MEGADOCK on Google Colaboratory☆17Updated last year
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆23Updated last year
- Pipeline for protein-protein interaction prediction☆23Updated 3 years ago