Alternatives and similar repositories for Rosalind-Problems

Users that are interested in Rosalind-Problems are comparing it to the libraries listed below

• cdeterman / Rosalind
  Rosalind Bioinformatics Problems
  ☆32Updated 10 years ago
• fls-bioinformatics-core / genomics
  Scripts, utilities and programs for genomic bioinformatics.
  ☆83Updated 2 months ago
• melbournebioinformatics / variant_calling_pipeline
  A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framewor…
  ☆34Updated 11 years ago
• stevetsa / awesome-microbes
  List of computational resources for analyzing microbial sequencing data.
  ☆68Updated 2 months ago
• avrilcoghlan / LittleBookofRBioinformatics
  A Little Book of R for Bioinformatics
  ☆51Updated 12 years ago
• umd-byob / presentations
  Bring Your Own Bioinformatics
  ☆27Updated 9 years ago
• schatzlab / appliedgenomics2017
  JHU EN.600.649: Computational Genomics: Applied Comparative Genomics
  ☆58Updated 7 years ago
• Kingsford-Group / scallop
  Scallop is a reference-based transcriptome assembler for RNA-seq
  ☆91Updated 4 years ago
• mattdoug604 / Rosalind
  A repository for my solutions to problems from - http://www.rosalind.info
  ☆22Updated 4 years ago
• biostars / biostar-handbook
  Issue tracker for the Biostar Handbook
  ☆63Updated 3 years ago
• dzerbino / oases
  De novo transcriptome assembler for short reads
  ☆63Updated 7 years ago
• trinityrnaseq / RNASeq_Trinity_Tuxedo_Workshop
  materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.
  ☆48Updated 8 years ago
• schatzlab / appliedgenomics2018
  Materials for Spring 2018 Applied Genomics Course
  ☆79Updated 6 years ago
• ngsutils / ngsutils
  Tools for next-generation sequencing analysis
  ☆89Updated 6 years ago
• dib-lab / dammit
  just annotate it, dammit!
  ☆93Updated 2 years ago
• CGATOxford / cgat
  Do not use - please refer to our newest code: https://github.com/cgat-developers/cgat-apps
  ☆124Updated 6 years ago
• ncbi / magicblast
  ☆37Updated 4 months ago
• griffithlab / rnaseq_tutorial_wiki
  The wiki repo, with pull request enabled, for the rnaseq_tutorial
  ☆26Updated 5 years ago
• lh3 / bfc
  High-performance error correction for Illumina resequencing data
  ☆72Updated 9 years ago
• joshuagryphon / plastid
  Position-wise analysis of sequencing and genomics data
  ☆41Updated 2 years ago
• opencb / hpg-variant
  A complete suite of tools to work with genomic variation data, from VCF tools to variant profiling or genomic statistics
  ☆13Updated 9 years ago
• NCBI-Hackathons / Community_Software_Tools_for_NGS
  ☆62Updated 8 years ago
• alesssia / YAMP
  YAMP: Yet Another Metagenomic Pipeline
  ☆60Updated 2 years ago
• dcdanko / MD2
  MicrobeDirectory 2.0
  ☆22Updated 5 years ago
• Czh3 / NGSTools
  Next-Generation Sequencing(NGS) toolkits.
  ☆48Updated 9 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated last month
• sestaton / Transposome
  A toolkit for annotation of transposable element families from unassembled sequence reads
  ☆30Updated 2 years ago
• bcgsc / orca
  Genomics Research Container Architecture
  ☆48Updated 6 years ago
• lpantano / seqcluster
  small RNA analysis from NGS data
  ☆37Updated 11 months ago
• ucdavis-bioinformatics / assemblathon2-analysis
  collection of scripts and commands used by Ian Korf, Keith Bradnam, and Joe Fass in the analysis of Assemblathon 2 entries (assemblies)
  ☆23Updated 4 years ago