☆29Jun 16, 2025Updated 10 months ago
Alternatives and similar repositories for sircovid
Users that are interested in sircovid are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)☆10Jul 11, 2025Updated 9 months ago
- R Package for individual based epidemiological models☆33Aug 12, 2025Updated 8 months ago
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆11May 4, 2021Updated 5 years ago
- Code for reconstructing influenza dynamics from surveillance data using evidence synthesis techniques☆21Apr 26, 2022Updated 4 years ago
- Contemporary statistical inference for infectious disease models using Stan☆16Mar 3, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- R package for managing virtual machines in Azure☆15Jan 30, 2023Updated 3 years ago
- Iterate multiple realisations of stochastic models☆20Aug 15, 2025Updated 8 months ago
- Fast and lightweight R6 parameter interface☆12Aug 28, 2022Updated 3 years ago
- Covid-19 epidemiology - data and analysis☆11Dec 7, 2023Updated 2 years ago
- ☆16Aug 18, 2021Updated 4 years ago
- Scripts for estimating and visualizing epidemiological modeling of an epidemic (developed for COVID-19)☆13May 28, 2021Updated 4 years ago
- Infectious disease model library and utilities☆15Sep 2, 2022Updated 3 years ago
- Updates to the synthetic contact matrices☆39Sep 27, 2023Updated 2 years ago
- ☆29Sep 10, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code for utilising VAE as means of doing exact MCMC inference in complex high-dimensional space☆14Jun 20, 2023Updated 2 years ago
- A small R package for finding timezone names from geographic coordinates☆12Feb 27, 2018Updated 8 years ago
- Simulating Plasmodium Epidemiological and Genetic Data☆12Apr 3, 2023Updated 3 years ago
- A cookbook of epidemiological models☆13Mar 1, 2019Updated 7 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Dec 9, 2023Updated 2 years ago
- Workshop on hhh4 and the endemic-epidemic framework☆19Oct 13, 2022Updated 3 years ago
- R6 object-oriented interface for mathematical sets.☆14Sep 29, 2023Updated 2 years ago
- ☆20Apr 9, 2021Updated 5 years ago
- Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic☆17Feb 13, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ᚩ A DSL for describing and solving differential equations in R☆106Jan 15, 2026Updated 3 months ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17May 9, 2024Updated last year
- An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…☆37Feb 2, 2023Updated 3 years ago
- R-package for building and fitting Bayesian ODE models in Stan☆30Sep 13, 2024Updated last year
- tools for LUR project☆10Aug 19, 2020Updated 5 years ago
- An R API to the Oxford COVID-19 Database☆12May 7, 2021Updated 4 years ago
- Vogliamo dal governo italiano tutti i dati su COVID-19 per monitorare il rischio epidemico, in formato aperto, ben descritti e machine re…☆10Sep 3, 2024Updated last year
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆134Updated this week
- Tool for visualising viral lineages in space and time. As seen on covid19.sanger.ac.uk and covglobe.org.☆10Jul 22, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Estimate epidemiological delay distributions with brms☆15Apr 13, 2026Updated 3 weeks ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆17Dec 7, 2023Updated 2 years ago
- R package for handling linelist data☆11Jan 1, 2026Updated 4 months ago
- Curated datasets on reported cases of the SARS-CoV-2 Omicron (B.1.1.529) Variant of Concern☆10Jan 25, 2022Updated 4 years ago
- SEIR transmission model of COVID-19. Documentation at:☆52Feb 15, 2024Updated 2 years ago
- epidemia package☆49Jun 24, 2022Updated 3 years ago
- A Bayesian model for time-series count data with weekend effects and a lagged reporting process☆10Mar 7, 2022Updated 4 years ago