☆11Oct 7, 2025Updated last year
Alternatives and similar repositories for somatic-combiner
Users that are interested in somatic-combiner are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 3 years ago
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆16Mar 6, 2024Updated 2 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆30Aug 20, 2024Updated 2 years ago
- DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell frac…☆22May 21, 2024Updated 2 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Junction centric alternative splicing translator☆22May 22, 2026Updated 5 months ago
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- Nextflow pipeline for Mutect2 somatic variant calling best practices☆24Jun 14, 2024Updated 2 years ago
- Toolkit for benchmarking fusion transcript predictions☆19Dec 24, 2025Updated 10 months ago
- Computational Framework to reconstructing tumor clone structures☆15Mar 31, 2021Updated 5 years ago
- protein deimmunization with a discrete diffusion model☆14Oct 11, 2026Updated 3 weeks ago
- The integrated pipeline for Indel detection☆17Apr 29, 2018Updated 8 years ago
- Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México☆26Oct 29, 2025Updated last year
- reference implementation of GA4GH WGS Quality Control Standards☆12Oct 20, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Config and setup to run nf-core/raredisease pipeline☆10Sep 11, 2025Updated last year
- ☆19Oct 24, 2023Updated 3 years ago
- ☆13Dec 14, 2017Updated 8 years ago
- An R wrapper for SigProfilerExtractor that allows de novo extraction of mutational signatures from data generated in a matrix format. The…☆15Jan 29, 2026Updated 9 months ago
- The deconvR is an R package designed for analyzing deconvolution of the bulk sample(s) using an atlas of reference omic signature profile…☆11Jul 22, 2026Updated 3 months ago
- Fast gpu-accelerated rigid-rigid docking onto protein backbones without a sequence.☆12Feb 18, 2026Updated 8 months ago
- DeTiN is designed to measure tumor-in-normal contamination and improve somatic variant detection sensitivity when using a contaminated ma…☆53May 20, 2022Updated 4 years ago
- A nextflow pipeline with a GMS touch for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbio…☆10Jan 23, 2026Updated 9 months ago
- ☆25Aug 1, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11Feb 12, 2024Updated 2 years ago
- ☆11Sep 7, 2023Updated 3 years ago
- Optimised pipeline to process whole genome sequence data from fastq to BAM on NCI Gadi☆21Jan 28, 2025Updated last year
- EukRef curation pipeline☆13May 11, 2021Updated 5 years ago
- BamQuery provides RNA-seq quantification for a given peptide (from 8 to 11 residues) in chosen RNA-seq samples (single or bulk).☆13Aug 12, 2024Updated 2 years ago
- The Exome Coverage and Identification Report displays the coverage of every target region in your capture design. It also displays regio…☆14Apr 22, 2015Updated 11 years ago
- Mutato is a toolkit for mutation analysis using DNA sequencing data☆12Nov 20, 2025Updated 11 months ago
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 8 months ago
- Cross-Attention Mechanism for Modeling the Interaction of HLA Class II Molecules with Peptides.☆12Jan 12, 2026Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆13Feb 7, 2025Updated last year
- Tumor Mutational Burden☆66Mar 17, 2026Updated 7 months ago
- Scientific code lint for R and Python analysis projects — agent-first design, structured ANALYSIS_OK waivers, 40 rules☆13Oct 1, 2026Updated last month
- VenusFold☆16Sep 14, 2026Updated last month
- Course Materials for Genomics Data Mining☆22Jul 17, 2026Updated 3 months ago
- ☆13Jun 7, 2024Updated 2 years ago
- NACraft for programmatic aptamer design☆17Oct 1, 2026Updated last month