mohit1997 / DZip
Compression
☆17Updated 4 years ago
Related projects: ⓘ
- Wavelet tree based on a fixed block boosting technique☆14Updated 3 years ago
- Dzip: improved general-purpose lossless compression based on novel neural network modeling☆59Updated 2 years ago
- NN based lossless compression☆144Updated 2 years ago
- Data compression using LSTM☆123Updated last year
- DartMinHash: Fast Sketching for Weighted Sets☆13Updated 3 years ago
- FM-Index full-text index implementation using RRR Wavelet trees (libcds) and fast suffix sorting (libdivsufsort) including experimental r…☆99Updated 9 years ago
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆14Updated 6 years ago
- Testing various methods for choosing tANS entropy coding automata☆70Updated 8 months ago
- Data compression using LSTM in TensorFlow☆96Updated last year
- msufsort parallel suffix array construction algorithm☆28Updated 3 years ago
- A space-efficient compressor based on the Re-Pair grammar☆11Updated 7 years ago
- Arithmetic Coding for Data Compression☆16Updated 6 years ago
- Fastq compression tool☆13Updated 4 years ago
- ProbMinHash – A Class of Locality-Sensitive Hash Algorithms for the (Probability) Jaccard Similarity☆42Updated 3 years ago
- Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]☆15Updated 3 years ago
- gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]☆25Updated 11 months ago
- novel high throughput entropy encoder for BWT data☆13Updated 2 years ago
- R-Index-F Library for Pattern Matching☆13Updated last month
- smith-waterman-gotoh alignment algorithm☆17Updated 7 years ago
- BagMinHash - Minwise Hashing Algorithm for Weighted Sets☆26Updated 4 years ago
- Error bounded lossy compression of time series using prediction-quantization approach☆25Updated last year
- SetSketch: Filling the Gap between MinHash and HyperLogLog☆48Updated 3 years ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Updated 2 years ago
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆83Updated 7 months ago
- A tool for merging large BWTs☆26Updated 3 years ago
- Educational implementation of BWT and FM-index☆57Updated 5 years ago
- Relative data structures based on the BWT☆12Updated 6 years ago
- BlastGraph is a new tool for computing intensive approximate pattern matching in a sequence graph or a de-Bruijn graph. Given an oriented…☆12Updated 11 years ago
- Simply feedforward neural network☆19Updated 7 years ago
- Source code for the Shifted Hamming Distance (SHD) filtering mechanism for sequence alignment. Described in the Bioinformatics journal pa…☆30Updated 4 years ago