mkorshe / single_cell_transcritpomics_roadmapLinks
☆17Updated 4 years ago
Alternatives and similar repositories for single_cell_transcritpomics_roadmap
Users that are interested in single_cell_transcritpomics_roadmap are comparing it to the libraries listed below
Sorting:
- published papers with a lot of data☆72Updated 2 months ago
- My youtube programming scripts☆53Updated 5 months ago
- SIB course on single cell transcriptomics by mostly using the Seurat pipeline☆82Updated 3 months ago
- The files and presentation from the Cytometry Core Facility flow cytometry data analysis course in R☆23Updated 5 years ago
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆54Updated last week
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆93Updated 2 years ago
- Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning☆58Updated 3 months ago
- ☆90Updated 4 years ago
- dandelion - A single cell BCR/TCR V(D)J-seq analysis package for 10X Chromium 5' data☆116Updated this week
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated 2 years ago
- coding exercise using TCGA immune infiltration data☆45Updated last year
- bioinformatics plotting and tools☆59Updated last year
- R package to access DoRothEA's regulons☆149Updated last year
- Tabula Muris Senis☆103Updated 2 years ago
- This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data☆121Updated 2 years ago
- A Shiny web app for mapping datasets using Seurat v4☆130Updated 7 months ago
- Spatial omic analysis toolbox for multi-resolution and multi-omic integration using image registration☆100Updated last month
- ☆39Updated 2 weeks ago
- A docker image for single-cell analysis☆88Updated 4 months ago
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆88Updated 11 months ago
- ☆81Updated 6 months ago
- A continually expanding collection of cancer genomics notes and data☆104Updated 2 months ago
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆118Updated 3 years ago
- Hands-on training on the latest methodologies and applications for the analysis of nucleic acids from eukaryotic single cells☆16Updated 11 months ago
- SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/☆23Updated 3 years ago
- This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.☆42Updated last year
- A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.☆90Updated 5 years ago
- ☆64Updated last year
- A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing☆162Updated last month
- ☆68Updated last year