Alternatives and similar repositories for single_cell_transcritpomics_roadmap

Users that are interested in single_cell_transcritpomics_roadmap are comparing it to the libraries listed below

• GenomicsUA / sc-school-2021
  ☆18Updated 4 years ago
• erilu / bulk-rnaseq-analysis
  A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…
  ☆90Updated 4 years ago
• BIMSBbioinfo / compgen_course_2025_module3
  Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning
  ☆60Updated 4 months ago
• sib-swiss / single-cell-training
  SIB course on single cell transcriptomics by mostly using the Seurat pipeline
  ☆84Updated 4 months ago
• hally166 / R_flowcytometry_course
  The files and presentation from the Cytometry Core Facility flow cytometry data analysis course in R
  ☆23Updated 5 years ago
• crazyhottommy / TCR-BCR-seq-analysis
  T/B cell receptor sequencing analysis notes
  ☆259Updated 7 months ago
• slowkow / awesome-vdj
  📚 Tools and databases for analyzing HLA and VDJ genes.
  ☆228Updated 2 months ago
• cellgeni / scRNA.seq.course
  Analysis of single cell RNA-seq data course
  ☆141Updated 2 years ago
• NBISweden / workshop-scRNAseq
  Single cell RNA sequencing analysis course
  ☆219Updated 3 months ago
• pachterlab / kallistobustools
  kallisto | bustools workflow for pre-processing single-cell RNA-seq data
  ☆118Updated 3 years ago
• crazyhottommy / compbio_tutorials
  My youtube programming scripts
  ☆54Updated 6 months ago
• czbiohub-sf / tabula-muris-senis
  Tabula Muris Senis
  ☆103Updated 2 years ago
• gladstone-institutes / Bioinformatics-Workshops
  Workshops presented by the Gladstone Bioinformatics Core
  ☆232Updated 2 months ago
• hbctraining / Intro-to-bulk-RNAseq
  Introduction to bulk RNA-seq
  ☆114Updated 2 months ago
• BIMSBbioinfo / flexynesis
  A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner
  ☆54Updated last week
• crazyhottommy / papers_with_data_to_mine
  published papers with a lot of data
  ☆73Updated 3 months ago
• BCCHR-trainee-omics-group / StudyGroup
  This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.
  ☆42Updated last year
• zhangyuqing / ComBat-seq
  Batch effect adjustment based on negative binomial regression for RNA sequencing count data
  ☆182Updated 4 years ago
• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆45Updated last year
• scverse / decoupler
  Python package to perform enrichment analysis from omics data.
  ☆212Updated last week
• scverse / muon
  muon is a multimodal omics Python framework
  ☆239Updated 4 months ago
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆135Updated last month
• hbctraining / Intro-to-DGE
  ☆204Updated 3 months ago
• KrishnaswamyLab / SingleCellWorkshop
  ☆91Updated 4 years ago
• saezlab / dorothea
  R package to access DoRothEA's regulons
  ☆149Updated last year
• pachterlab / kb_python
  A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing
  ☆164Updated last month
• brandonyph / LiquidBrain_Scripts
  This folder ultimately should contains all my project shown in my Youtube channel.
  ☆37Updated 2 years ago
• pwwang / scplotter
  scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…
  ☆169Updated 2 weeks ago
• phbradley / conga
  Clonotype Neighbor Graph Analysis
  ☆89Updated last week
• hamidghaedi / RNA-seq-differential-expression
  Differential gene expression analysis on RNA-seq data
  ☆11Updated last year