Alternatives and similar repositories for RNAseq-Pipeline

Users that are interested in RNAseq-Pipeline are comparing it to the libraries listed below

• evanpeikon / bash_fundamentals
  Introduction to Bash for bioinformatics
  ☆50Updated last year
• BIMSBbioinfo / compgen_course_2025_module3
  Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning
  ☆64Updated 4 months ago
• evanpeikon / math_for_compbio
  This repository contains math tutorials I created for Bioinformatics and Computational Biology.
  ☆95Updated last year
• evanpeikon / co_expression_network
  A DIY guide to gene co-expression network analysis
  ☆13Updated 8 months ago
• BioinformaNicks / Bioinformatics-training-collection
  A collection of resources for learning about tools and programming languages related to Bioinformatics
  ☆188Updated 3 years ago
• raphaelmourad / LLM-for-genomics-training
  Tutorial on large language models for genomics
  ☆266Updated 6 months ago
• lynnlangit / aws-for-bioinformatics
  AWS for Bioinformatics Researchers
  ☆184Updated 5 months ago
• CebolaLab / RNA-seq
  Step-by-step analysis pipeline for RNA-seq data
  ☆160Updated 2 years ago
• evanpeikon / Amilioride_Drug_MOA
  Uncovering Amiloride's Mechanisms of Action in Multiple Myeloma: A Bioinformatics Approach
  ☆27Updated 10 months ago
• digo4 / Clinical-Genomics
  Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline
  ☆43Updated last year
• evanpeikon / Python_Fundamentals_Biology
  Python Fundamentals for Biologists
  ☆39Updated last year
• deanslee / FigureOneLab
  Hone computational biology skills by re-enacting Figure 1 of modern biology papers
  ☆263Updated last year
• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆46Updated last year
• gladstone-institutes / Bioinformatics-Workshops
  Workshops presented by the Gladstone Bioinformatics Core
  ☆242Updated last month
• rnnh / bioinfo-notebook
  🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
  ☆200Updated 5 years ago
• evanpeikon / R_Fundamentals_Biologists
  R Fundamentals for Biologists
  ☆33Updated 11 months ago
• harvardinformatics / bioinformatics-coffee-hour
  Short lessons from FAS Informatics coffee hour
  ☆155Updated 2 years ago
• hbctraining / Intro-to-DGE
  ☆211Updated 4 months ago
• sib-swiss / first-steps-with-python-training
  repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training
  ☆65Updated last month
• hbctraining / Intro-to-rnaseq-hpc-O2
  This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster
  ☆174Updated 4 years ago
• hbctraining / Intro-to-bulk-RNAseq
  Introduction to bulk RNA-seq
  ☆130Updated 7 months ago
• mhtjsh / Bioinformatics_Algorithms
  I am sharing my code repository to understand the working and principle of working of various BioInformatics code in Python
  ☆30Updated 2 months ago
• griffithlab / rnabio.org
  website for the rnaseq course
  ☆114Updated 3 weeks ago
• CompEpigen / figeno
  Tool for plotting sequencing data along genomic coordinates.
  ☆335Updated 2 weeks ago
• hamidghaedi / RNA-seq-differential-expression
  Differential gene expression analysis on RNA-seq data
  ☆12Updated last year
• Bioinformatics-Research-Network / skill-assessments
  Training requirements for joining projects
  ☆84Updated last year
• evanpeikon / functional_enrichment_analysis
  A DIY guide to gene ontology, pathway, and gene set enrichment analysis
  ☆26Updated last year
• j-andrews7 / awesome-bioinformatics-benchmarks
  A curated and summarized list of bioinformatics bench-marking papers and resources.
  ☆350Updated last month
• erilu / bulk-rnaseq-analysis
  A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…
  ☆112Updated 5 years ago
• Bioconductor / bioconductor-training
  Bioconductor teaching and education committee
  ☆53Updated this week