Alternatives and similar repositories for RNAseq-Pipeline

Users that are interested in RNAseq-Pipeline are comparing it to the libraries listed below

• evanpeikon / bash_fundamentals
  Introduction to Bash for bioinformatics
  ☆48Updated last year
• evanpeikon / co_expression_network
  A DIY guide to gene co-expression network analysis
  ☆12Updated 5 months ago
• digo4 / Clinical-Genomics
  Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline
  ☆43Updated last year
• BIMSBbioinfo / compgen_course_2025_module3
  Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning
  ☆64Updated last month
• raphaelmourad / LLM-for-genomics-training
  Tutorial on large language models for genomics
  ☆248Updated 3 months ago
• BioinformaNicks / Bioinformatics-training-collection
  A collection of resources for learning about tools and programming languages related to Bioinformatics
  ☆182Updated 3 years ago
• evanpeikon / math_for_compbio
  This repository contains math tutorials I created for Bioinformatics and Computational Biology.
  ☆95Updated last year
• deanslee / FigureOneLab
  Hone computational biology skills by re-enacting Figure 1 of modern biology papers
  ☆255Updated last year
• CebolaLab / RNA-seq
  Step-by-step analysis pipeline for RNA-seq data
  ☆140Updated 2 years ago
• sib-swiss / first-steps-with-python-training
  repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training
  ☆63Updated 3 weeks ago
• evanpeikon / Python_Fundamentals_Biology
  Python Fundamentals for Biologists
  ☆38Updated 10 months ago
• lynnlangit / aws-for-bioinformatics
  AWS for Bioinformatics Researchers
  ☆180Updated 2 months ago
• rnnh / bioinfo-notebook
  🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
  ☆188Updated 4 years ago
• gladstone-institutes / Bioinformatics-Workshops
  Workshops presented by the Gladstone Bioinformatics Core
  ☆236Updated 3 weeks ago
• evanpeikon / R_Fundamentals_Biologists
  R Fundamentals for Biologists
  ☆33Updated 7 months ago
• harvardinformatics / bioinformatics-coffee-hour
  Short lessons from FAS Informatics coffee hour
  ☆152Updated 2 years ago
• mhtjsh / Bioinformatics_Algorithms
  I am sharing my code repository to understand the working and principle of working of various BioInformatics code in Python
  ☆30Updated 8 months ago
• evanpeikon / Amilioride_Drug_MOA
  Uncovering Amiloride's Mechanisms of Action in Multiple Myeloma: A Bioinformatics Approach
  ☆26Updated 7 months ago
• hbctraining / Intro-to-DGE
  ☆206Updated last month
• hbctraining / Intro-to-rnaseq-hpc-O2
  This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster
  ☆171Updated 4 years ago
• evanpeikon / Bioinformatics_Toolkit
  A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessib…
  ☆405Updated 2 weeks ago
• hamidghaedi / RNA-seq-differential-expression
  Differential gene expression analysis on RNA-seq data
  ☆11Updated last year
• evanpeikon / scRNA_Prediction
  Predictive Modeling of Gene Expression in Skeletal Muscle Using scRNA-seq
  ☆10Updated 11 months ago
• Bioconductor / bioconductor-training
  Bioconductor teaching and education committee
  ☆50Updated last week
• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆46Updated last year
• BioinformHER / Module-1-Mini-Project
  ☆11Updated last year
• hbctraining / Intro-to-bulk-RNAseq
  Introduction to bulk RNA-seq
  ☆122Updated 4 months ago
• Bioinformatics-Research-Network / skill-assessments
  Training requirements for joining projects
  ☆80Updated last year
• boulderrinnlab / MASTER_CLASS
  ☆10Updated 3 months ago
• ISUgenomics / bioinformatics-workbook
  Bioinformatics Workbook repository
  ☆192Updated 2 weeks ago