Alternatives and similar repositories for GGGenome

Users that are interested in GGGenome are comparing it to the libraries listed below

• yyoshiaki / ikra
  RNAseq pipeline centered on Salmon
  ☆27Updated 5 months ago
• Kan-E / RNAseqChef
  Web app for automated, systematic, and integrated RNA-seq differential expression analysis
  ☆15Updated last month
• inutano / chip-atlas
  ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser
  ☆73Updated last week
• Imamachi-n / NGS-Tutorial
  NGS Tutorial
  ☆15Updated 8 years ago
• drpowell / degust
  An interactive web-tool for RNA-seq analysis
  ☆68Updated 2 months ago
• yuifu / millefy
  Millefy: Genome browser-like visualization of single-cell RNA-seq dataset
  ☆29Updated 5 years ago
• fukunagatsu / RIblast
  RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome a…
  ☆17Updated 2 years ago
• genome-sci / python_bioinfo_2022
  ☆12Updated 2 years ago
• zhangwei2015 / IMonitor
  This script use to analyze the immune repertoire sequenced by high throughtput sequencing
  ☆25Updated 3 years ago
• khigashi1987 / scRNAseq_handson
  PythonによるシングルセルRNA-seq解析。
  ☆20Updated 2 years ago
• rikenbit / ramdaq
  ☆13Updated 2 months ago
• yyoshiaki / VIRTUS
  A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
  ☆34Updated 3 years ago
• gladstone-institutes / Interactive-Enrichment-Analysis
  A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
  ☆28Updated last month
• nig-sc / nigsc_homepage2
  ☆3Updated last week
• pitagora-network / pitagora-cwl
  Common Workflow Language tools and workflows by Pitagora-Network
  ☆33Updated 2 years ago
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 5 years ago
• asntech / pyjaspar
  pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs
  ☆27Updated 2 weeks ago
• MoMI-G / MoMI-G
  Modular Multi-scale Integrated Genome Graph Browser
  ☆92Updated 6 months ago
• yuifu / ajacs68
  Materials for tutorial at ajacs68 (Japanese)
  ☆33Updated 7 years ago
• pitagora-network / DAT2-cwl
  Common Workflow Language definition files for workflows introduced in DAT2
  ☆11Updated 2 years ago
• inutano / pfastq-dump
  parallel-fastq-dump implementation in bash script
  ☆41Updated 5 years ago
• nf-core / airrflow
  B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
  ☆60Updated 2 weeks ago
• OceanGenomics / mudskipper
  A tool for projecting genomic alignments to transcriptomic coordinates
  ☆36Updated 11 months ago
• nf-core / rnasplice
  rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
  ☆54Updated 2 weeks ago
• gagneurlab / absplice
  ☆38Updated 8 months ago
• dsurujon / ShinyOmics
  Exploration of Omics data
  ☆25Updated 4 years ago
• workflow-meetup-jp / workflow-meetup
  About Workflow related meetup
  ☆14Updated 5 months ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆25Updated last year
• datapplab / pathview
  pathway based data integration and visualization
  ☆41Updated last month
• s-andrews / SeqMonk
  SeqMonk NGS visualisation and analysis tool
  ☆49Updated last week