Alternatives and similar repositories for bio-alignment

Users that are interested in bio-alignment are comparing it to the libraries listed below

• niaid / virome-pipeline
  This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.
  ☆13Updated last month
• artedison / Edison_Lab_Shared_Metabolomics_UGA
  Official Edison Lab toolboxes and scripts for analyzing metabolomics data.
  ☆14Updated 2 years ago
• yufree / pmd
  Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
  ☆11Updated 8 months ago
• cwieder / py-ssPA
  Single sample pathway analysis tools for omics data
  ☆13Updated last year
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆13Updated last week
• cwieder / PathIntegrate
  PathIntegrate Python package for pathway-based multi-omics data integration
  ☆18Updated last year
• ZhuMetLab / MetImage
  Converting LC−MS-based Untargeted Metabolomics Data into Image towards Clinical Diagnosis
  ☆12Updated 2 years ago
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆11Updated 4 months ago
• mwang87 / GNPS_MASST
  ☆14Updated 2 weeks ago
• xelphin-fever / matam-notes
  Notes for "Introduction to Systems Programming" - 234124 (Technion)
  ☆13Updated 3 years ago
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 5 years ago
• computational-chemical-biology / ChemWalker
  ☆11Updated last year
• Noble-Lab / crema
  Confidence Estimation for Mass Spectrometry Proteomics
  ☆13Updated 8 months ago
• horvatovichlab / MSIWarp
  MAss spectra alignment tool for MSI data
  ☆19Updated 3 years ago
• computational-metabolomics / structToolbox
  R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis m…
  ☆11Updated 8 months ago
• mohimanilab / MetaMiner
  a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs
  ☆12Updated 4 years ago
• zhengfj1994 / MRM-Ion_Pair_Finder
  Defined MRM transitions from untargeted metabolomics data
  ☆10Updated 2 years ago
• ANHIG / IPDMHC
  Github for files currently published in the IPD-MHC FTP Directory hosted at the European Bioinformatics Institute
  ☆16Updated 3 weeks ago
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• aberHRML / metabolighteR
  R Interface to the Metabolights REST API
  ☆11Updated 5 months ago
• danon6868 / BI-ml-2024
  Course "Machine learning" in Bioinformatics Institute
  ☆16Updated last year
• respiratory-immunology-lab / metabolome-lipidome-MSDIAL
  Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of m…
  ☆22Updated last year
• rformassspectrometry / book
  R for Mass Spectrometry documentation
  ☆14Updated 2 months ago
• kusterlab / universal_spectrum_explorer
  ☆14Updated 4 years ago
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆22Updated 4 years ago
• saezlab / ShinyFUNKI
  FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…
  ☆14Updated 4 years ago
• danielatrivella / NP3_MS_Workflow
  A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis
  ☆15Updated 3 weeks ago
• broadinstitute / bmxp
  The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …
  ☆13Updated 2 months ago
• weiran-zhao / java_cs61b
  self study java, through cs61b (http://www.cs.berkeley.edu/~jrs/61b/)
  ☆10Updated 12 years ago
• joonan-lab / cwas
  Category-wide association study (CWAS) (Werling et al., 2018; An et al., 2018)
  ☆10Updated last month