CastleLi / scBSP
☆18Updated last month
Alternatives and similar repositories for scBSP:
Users that are interested in scBSP are comparing it to the libraries listed below
- scBSP is a specialized package designed for processing biological data, specifically in the analysis of gene expression and cell coordina…☆22Updated 7 months ago
- official repo for scPEFT☆29Updated this week
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆59Updated 2 months ago
- This is the official repository of Prot2Token paper.☆26Updated last week
- ☆49Updated last year
- ☆39Updated last week
- python tools for TCR:peptide-MHC modeling and analysis☆72Updated 11 months ago
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆31Updated 3 months ago
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆18Updated this week
- MaveDB API☆13Updated this week
- ☆11Updated last year
- Tool for rapid clustering of antibody models by the structure of their CDRs.☆20Updated 5 months ago
- A visualization software for antibody multi sequence alignment☆18Updated 9 months ago
- TEIM: TCR-Epitope Interaction Modeling☆46Updated last year
- Public repository describing training and testing of AntiBERTa.☆58Updated last year
- ☆78Updated 5 months ago
- Antibody-Specific Epitope Mapping☆12Updated 4 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆96Updated 6 months ago
- ☆34Updated last year
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆33Updated 3 years ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆26Updated 11 months ago
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆42Updated 5 months ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆40Updated 3 months ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆52Updated 2 years ago
- open source code for Tencent tFold☆94Updated 2 weeks ago
- ☆19Updated 9 months ago
- ☆19Updated 2 years ago
- ☆66Updated 6 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆66Updated 2 years ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 3 years ago