Alternatives and similar repositories for HiBrowser

Users that are interested in HiBrowser are comparing it to the libraries listed below

• ENCODE-DCC / hic-pipeline
  HiC uniform processing pipeline
  ☆62Updated 2 years ago
• ShiLab-Bioinformatics / subread
  The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…
  ☆52Updated 2 years ago
• ygidtu / trackplot
  trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…
  ☆99Updated last week
• tderrien / FEELnc
  FEELnc : FlExible Extraction of LncRNA
  ☆92Updated 4 months ago
• mritchielab / long_read_tools
  A catalogue of available long read sequencing data analysis tools
  ☆83Updated 2 months ago
• openbiox / bioinformatics-100-days
  Learn and practice the bioinformatics skills in 100 Days.
  ☆78Updated 6 years ago
• gatk-workflows / gatk4-rnaseq-germline-snps-indels
  Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools
  ☆82Updated 4 years ago
• hzi-bifo / RiboDetector
  Accurate and rapid RiboRNA sequences Detector based on deep learning
  ☆116Updated 2 weeks ago
• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆105Updated 4 years ago
• Tong-Chen / NGS
  Scripts for next generation sequencing
  ☆49Updated 6 years ago
• MikeAxtell / ShortStack
  ShortStack: Comprehensive annotation and quantification of small RNA genes
  ☆97Updated last month
• shenmengyuan / RNA_seq_Biotrainee
  DEG analysis and KEGG/GO enrichment analysis
  ☆69Updated 7 years ago
• bioinform / rnacocktail
  ☆89Updated 5 years ago
• ncbi / TPMCalculator
  TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files
  ☆134Updated last year
• Zhong-Lab-UCSD / Genomic-Interactive-Visualization-Engine
  Genomic Interactive Visualization Engine
  ☆146Updated 2 years ago
• guoweilong / cgmaptools
  toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR
  ☆67Updated last year
• YaoLab-Bioinfo / shinyCircos-V2.0
  an R/Shiny application for interactive creation of Circos plot
  ☆50Updated 2 years ago
• hoelzer-lab / rnaflow
  A simple RNA-Seq differential gene expression pipeline using Nextflow
  ☆100Updated 4 months ago
• dieterich-lab / JACUSA2
  New version of JACUSA -> 2.0
  ☆30Updated 3 weeks ago
• robinweide / GENOVA
  GENome Organisation Visual Analytics
  ☆81Updated 11 months ago
• rajewsky-lab / mirdeep2
  Discovering known and novel miRNAs from small RNA sequencing data
  ☆156Updated last week
• zhpn1024 / ribotish
  Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data
  ☆43Updated last month
• shenwei356 / bio_scripts
  Practical, reusable scripts for bioinformatics
  ☆102Updated 6 years ago
• indexofire / ndafp
  New version
  ☆35Updated 9 years ago
• GoekeLab / sg-nex-data
  Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project
  ☆145Updated 3 months ago
• PacificBiosciences / barcoding
  Lima - Demultiplex Barcoded PacBio Samples
  ☆67Updated 7 months ago
• frankvogt / vcf2gwas
  Python API for comprehensive GWAS analysis using GEMMA
  ☆102Updated 2 years ago
• nf-core / smrnaseq
  A small-RNA sequencing analysis pipeline
  ☆98Updated last week
• hbctraining / Intro-to-rnaseq-hpc-salmon
  ☆50Updated 4 years ago
• epi2me-labs / wf-transcriptomes
  ☆108Updated 3 weeks ago