Alternatives and similar repositories for TAPER-EHR

Users that are interested in TAPER-EHR are comparing it to the libraries listed below

• ZhiGroup / pytorch_ehr
  source codes based on PyTorch to analyze EHR
  ☆142Updated last year
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆95Updated 3 weeks ago
• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆111Updated 2 years ago
• emnlp-mimic / mimic
  ☆22Updated 3 years ago
• Yuqi92 / deep-patient-representation-mimiciii-multitask
  Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction
  ☆32Updated 5 years ago
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆290Updated last year
• weimin17 / Multimodal_Transformer
  A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction
  ☆34Updated 2 years ago
• MLD3 / FIDDLE-experiments
  Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139
  ☆25Updated 3 years ago
• mmcdermott / comprehensive_MTL_EHR
  Source code for a comprehensive analysis of MTL over EHR timeseries data.
  ☆37Updated 2 years ago
• thomasnguyen92 / MIMIC-IV-ICD-data-processing
  ☆39Updated 2 years ago
• ratschlab / HIRID-ICU-Benchmark
  Repository for the HiRID ICU Benchmark (HiB) project
  ☆57Updated 2 years ago
• deepmedicine / Targeted-BEHRT
  Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records
  ☆20Updated 2 years ago
• Google-Health / records-research
  ☆222Updated 3 years ago
• ratschlab / circEWS
  circEWS public code
  ☆69Updated 8 months ago
• li-lab-mcgill / mixehr
  ☆16Updated 4 years ago
• landiisotta / convae_architecture
  ☆40Updated 3 years ago
• AmsterdamUMC / AmsterdamUMCdb
  AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916
  ☆184Updated 6 months ago
• mp2893 / mime
  MiME Repository
  ☆105Updated 5 years ago
• nwams / ClinicalBERT-Deep-Learning--Predicting-Hospital-Readmission-Using-Transformer
  Blog post on Medium
  ☆49Updated 2 years ago
• rvandewater / YAIB
  🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…
  ☆72Updated this week
• nliulab / mimic4ed-benchmark
  Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.
  ☆83Updated 2 years ago
• MLforHealth / MIMIC_Extract
  MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III
  ☆449Updated 11 months ago
• kaggarwal / ClinicalNotesICU
  ☆25Updated 5 years ago
• healthylaife / MIMIC-IV-Data-Pipeline
  A customizable pipeline for data extraction from MIMIC-IV.
  ☆241Updated last year
• tanlab / ConvolutionMedicalNer
  ☆12Updated 3 years ago
• MIT-LCP / mimic-iv
  Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code
  ☆284Updated 4 years ago
• USC-Melady / Benchmarking_DL_MIMICIII
  ☆129Updated 9 months ago
• EmmaRocheteau / TPC-LoS-prediction
  This repository contains the code used for Temporal Pointwise Convolutional Networks for Length of Stay Prediction in the Intensive Care …
  ☆79Updated 3 months ago
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆45Updated last year
• whaleloops / TransformEHR
  ☆41Updated last year