IreneZihuiLi / EHRKit-2022
A Python Natural Language Processing Toolkit for Electronic Health Record Texts
☆12Updated last year
Alternatives and similar repositories for EHRKit-2022:
Users that are interested in EHRKit-2022 are comparing it to the libraries listed below
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 4 months ago
- Official repository of "EHR-SeqSQL : A Sequential Text-to-SQL Dataset For Interactively Exploring Electronic Health Records" (ACL 2024 Fi…☆15Updated 7 months ago
- jayetri / DrugEHRQA-A-Question-Answering-Dataset-on-Structured-and-Unstructured-Electronic-Health-Records☆9Updated 2 years ago
- Self-verification for LLMs.☆63Updated last year
- ☆22Updated last month
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆26Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆30Updated 9 months ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆61Updated last year
- ☆29Updated 3 years ago
- ☆25Updated last year
- General tutorials for the setup and use of MedCAT.☆36Updated last month
- ☆57Updated last year
- REMed: Retrieval-Enhanced Medical prediction model☆15Updated last month
- Code for the paper "Automated Generation of Hospital Discharge Summaries Using Clinical Guidelines and Large Language Models"☆9Updated 10 months ago
- Implements ChatGPT API via request package.☆45Updated last year
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆12Updated 6 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆38Updated 11 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆79Updated this week
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆42Updated 11 months ago
- [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records☆76Updated 3 months ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆42Updated last year
- A corpus of textual data corresponding to synthetic clinical encounters, including each encounters’ dialogue transcript and clinical note…☆33Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆27Updated 10 months ago
- PMC-Patients☆92Updated 8 months ago
- A python package for removing duplicate text in clinical notes or other documents☆36Updated 4 years ago
- Transformers for Clinical NLP☆23Updated last month
- Large language model of Medical AI, General Medical AI (GMAI)☆15Updated last year
- Code base, outputs, scoring guidelines and annotations for ChatGPT NCCN evaluation | Paper: https://jamanetwork.com/journals/jamaoncology…☆18Updated last year
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆28Updated last year
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 2 years ago