Rvbens / non-coding-DNA-classifier
Deep learning multi-label classifier of non-coding DNA sequences
☆12Updated 5 years ago
Alternatives and similar repositories for non-coding-DNA-classifier
Users that are interested in non-coding-DNA-classifier are comparing it to the libraries listed below
Sorting:
- "DeepDiff: Deep-learning for predicting Differential gene expression from histone modifications", Bioinformatics, Volume 34, Issue 17,☆20Updated 5 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆30Updated last year
- ☆34Updated 3 years ago
- ☆12Updated 4 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆72Updated 4 years ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆81Updated 8 months ago
- ☆10Updated 5 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…☆43Updated 2 years ago
- Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction☆25Updated 7 years ago
- Predicting gene expression levels from genomic sequences☆53Updated 4 years ago
- Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications☆63Updated 4 years ago
- This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'☆94Updated last year
- CNN architecture for predicting DNA binding sites for Transcription Factors☆52Updated 6 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 4 years ago
- Elucidating the Utility of Genomic Elements with Neural Nets☆69Updated 5 months ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 8 years ago
- ☆17Updated 3 years ago
- Motif Transformers for Predicting Protein-Protein Interactions Between a Novel Virus and Humans☆10Updated 5 months ago
- ☆19Updated 4 years ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆35Updated 3 weeks ago
- A Transformer Architecture Based on BERT and 2D Convolutional Neural Network to Identify DNA Enhancers from Sequence Information☆24Updated 3 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆48Updated 9 months ago
- ☆24Updated last year
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Updated 2 years ago
- End-to-End learning framework for circular RNA classification from other long non-coding RNA using multimodal deep learning☆24Updated 5 years ago
- ☆60Updated 2 years ago
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆39Updated 3 years ago
- [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …☆30Updated 3 years ago