Deep learning multi-label classifier of non-coding DNA sequences
☆11Mar 3, 2020Updated 6 years ago
Alternatives and similar repositories for non-coding-DNA-classifier
Users that are interested in non-coding-DNA-classifier are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆34Oct 27, 2021Updated 4 years ago
- A repository with exploration into using transformers to predict DNA ↔ transcription factor binding☆88Jun 2, 2022Updated 4 years ago
- Transformers for gene expression prediction from raw dna sequences☆16Apr 29, 2022Updated 4 years ago
- Predict prokaryotic hosts for phage (meta) genomic sequences☆11Apr 4, 2022Updated 4 years ago
- VIDHOP is a virus host predicting tool. Its able to predict influenza A virus, rabies lyssavirus and rotavirus A.☆23May 7, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Jul 5, 2020Updated 6 years ago
- ☆13Jul 23, 2020Updated 5 years ago
- DeepCrystal: A Deep Learning Framework for sequence-based Protein Crystallization Prediction☆18Oct 2, 2025Updated 9 months ago
- Deep learning-based language model for glycan sequences☆18Jan 17, 2020Updated 6 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- Official implementation of a temporal pupil light response model proposed in the Scientific Reports article: "Deep learning-based pupil m…☆11Jan 6, 2023Updated 3 years ago
- AnnapuRNA: a scoring function for predicting RNA-small molecule interactions.☆21Apr 5, 2024Updated 2 years ago
- ☆10Mar 5, 2019Updated 7 years ago
- Analysis code for the TAP-seq manuscript.☆11Jun 25, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆17Sep 17, 2019Updated 6 years ago
- Supplementary files for paper "Detection and removal of barcode swapping in single-cell RNAseq".☆11Jul 5, 2018Updated 8 years ago
- Probabilistic Programming in Julia☆14Mar 19, 2024Updated 2 years ago
- ☆14Jun 16, 2026Updated 2 weeks ago
- A Tensorflow SqueezeNet implementation☆14Oct 1, 2018Updated 7 years ago
- This is the complete code base used in Robert A. Edwards, Katelyn McNair, Karoline Faust, Jeroen Raes, and Bas E. Dutilh (2015) Computati…☆17Nov 7, 2021Updated 4 years ago
- Implement the test part of YOLOv2 with TensorFlow.☆10Nov 15, 2017Updated 8 years ago
- viral Host UnveiLing Kit (vHULK)☆15May 15, 2025Updated last year
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Bayesian-based fetal genotyping using maternal cell-free DNA and parental sequencing data.☆14Jun 5, 2019Updated 7 years ago
- Code associated with the manuscript Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in t…☆22Aug 19, 2022Updated 3 years ago
- classifying human DNA sequence and random ATCG sequences, using keras CNN☆23Jul 8, 2017Updated 8 years ago
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 2 years ago
- Utilities for working with W&B and PyTorch Lightning in an educational context☆15Aug 4, 2021Updated 4 years ago
- implemented Grad-CAM https://arxiv.org/abs/1610.02391 for mnist datasets in Keras☆12Nov 25, 2018Updated 7 years ago
- A rapid and low-memory multiple-genome aligner for closely related genomes☆26Sep 3, 2025Updated 10 months ago
- A Deep Learning Model for Predicting Next-Generation Sequencing Depth from DNA Sequence☆23Jul 8, 2021Updated 4 years ago
- python codes for iDNA-ABF: multi-scale deep biological language learning model for the accurate and interpretable prediction of DNA methy…☆15May 6, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Python interface to cd-hit☆10Feb 26, 2019Updated 7 years ago
- 🔬 R package: Analysis of Large Affymetrix Microarray Data Sets☆12Dec 14, 2025Updated 6 months ago
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆11Dec 3, 2023Updated 2 years ago
- Deep Learning For Biological Sequence Data: From Convolutional Neural Networks To Transformers, our tutorial into DL presented at 21st Eu…☆10Sep 20, 2022Updated 3 years ago
- A Unified RNA Sequencing Model (URSM) for joint analysis of single cell and bulk RNA-seq data.☆11Oct 20, 2017Updated 8 years ago
- DeepVariant-on-Spark is a germline short variant calling pipeline that runs Google DeepVariant on Apache Spark at scale.☆12May 4, 2022Updated 4 years ago
- 🔥 DNA微分催化与肽计算， 元基花计算，进化计算，遗传计算，智慧计算，索引计算，元基编码，肽展公式，大数据计算分析☆17Nov 12, 2025Updated 7 months ago