Alternatives and similar repositories for Medical-NER:

Users that are interested in Medical-NER are comparing it to the libraries listed below

• simonlevine / clinical-longformer
  ☆38Updated 3 years ago
• smitkiri / ehr-relation-extraction
  NER and Relation Extraction from Electronic Health Records (EHR).
  ☆88Updated 3 years ago
• acadTags / Explainable-Automated-Medical-Coding
  Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)
  ☆61Updated 2 years ago
• uf-hobi-informatics-lab / ClinicalTransformerNER
  a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms
  ☆147Updated last year
• suamin / ICD-BERT
  ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)
  ☆74Updated 2 years ago
• Melbourne-BMDS / mimic34md2020_materials
  ☆22Updated 2 years ago
• bvanaken / clinical-outcome-prediction
  Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
  ☆94Updated 8 months ago
• gmichalo / UmlsBERT
  ☆98Updated 3 years ago
• luoyuanlab / Clinical-Longformer
  ☆59Updated last year
• ziyuqiu / icd_prediction
  Predicting Medical Billing Codes (ICD9) from Clinical Notes (in MIMIC-III datasets) using Deep Learning
  ☆25Updated 4 years ago
• facebookresearch / bio-lm
  We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.
  ☆159Updated 3 years ago
• uf-hobi-informatics-lab / NLPreprocessing
  A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization
  ☆31Updated 11 months ago
• ckbjimmy / clneg
  Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification
  ☆21Updated 5 years ago
• som-shahlab / trove
  Weakly supervised medical named entity classification
  ☆73Updated 2 years ago
• nwams / ClinicalBERT-Deep-Learning--Predicting-Hospital-Readmission-Using-Transformer
  Blog post on Medium
  ☆49Updated 2 years ago
• 3778 / icd-prediction-mimic
  Predicting ICD Codes from Clinical Notes
  ☆60Updated 4 years ago
• uf-hobi-informatics-lab / SDoH_SODA
  ☆18Updated last year
• jind11 / Deep-PICO-Detection
  ☆16Updated 2 years ago
• asappresearch / clip
  ☆29Updated 3 years ago
• umassbento / ehrbert
  A fine-tuned BERT using EHR notes.
  ☆14Updated 5 years ago
• uf-hobi-informatics-lab / ClinicalTransformerRelationExtraction
  A project for developing transformer-based models for clinical relation extraction
  ☆127Updated last year
• Machine-Learning-for-Medical-Language / cnlp_transformers
  Transformers for Clinical NLP
  ☆24Updated last week
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆78Updated 2 years ago
• r-mal / umls-embeddings
  Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System
  ☆39Updated 5 years ago
• allenai / ms2
  ☆67Updated 2 years ago
• kamalkraj / BioELECTRA
  BioELECTRA
  ☆50Updated 3 years ago
• fastforwardlabs / few-shot-text-classification
  ☆61Updated 4 years ago
• usmaann / BioALBERT
  Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT
  ☆29Updated 3 years ago
• jind11 / PubMed-PICO-Detection
  PubMed PICO Element Detection Dataset
  ☆56Updated 6 years ago
• MLforHealth / HurtfulWords
  Quantifying biases in BERT embeddings pretrained on MIMIC-III clinical notes
  ☆24Updated 4 years ago