Real-time 3D visualization for biomedical data and beyond in Python
☆14Feb 10, 2026Updated 8 months ago
Alternatives and similar repositories for LibCarna-Python
Users that are interested in LibCarna-Python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated batch processing of tissue microscopy image data with a text-based interface☆10Mar 24, 2026Updated 7 months ago
- network-flow based object tracking☆10Sep 14, 2026Updated last month
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 4 years ago
- ☆15Updated this week
- napari widgets for start-to-finish batch processing☆15Jun 1, 2026Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ilastik plugin for napari☆15Mar 2, 2026Updated 8 months ago
- ☆15Sep 4, 2026Updated 2 months ago
- A napari plugin to analysis point spread functions.☆11Apr 27, 2026Updated 6 months ago
- ☆16Feb 2, 2026Updated 9 months ago
- napari plugin to open CZI image files and their metadata☆17Updated this week
- Tiled processing of arbitrarily large images — any image, any function.☆20Updated this week
- Teaching materials and outline for the Pasteur Bioimage Analysis vour☆17Jun 2, 2025Updated last year
- Simple python tool to search http://ixirc.com/☆10Apr 16, 2019Updated 7 years ago
- ☆18Oct 12, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 10 months ago
- Higher-Order Cell Tracking (HOCT)☆27Oct 16, 2026Updated 3 weeks ago
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated last year
- Library for computing centrality for graph nodes☆10Dec 9, 2015Updated 10 years ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆19Apr 8, 2025Updated last year
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆41Aug 7, 2026Updated 3 months ago
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python.☆21Updated this week
- Tutorial on flexible parallelization in Python using Dask and in R using future☆11May 28, 2026Updated 5 months ago
- Automated batch processing of cell and tissue microscopy image data in Napari☆24Oct 21, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆24Nov 24, 2025Updated 11 months ago
- ☆10Sep 18, 2015Updated 11 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Updated this week
- Guides and code for 3D nuclear instance segmentation☆25Dec 2, 2025Updated 11 months ago
- Fluorescence Lifetime Ultimate Explorer (FLUTE) is a GUI for exploring and analyzing Fluorescence Lifetime Microscopy (FLIM) data☆32Nov 17, 2025Updated 11 months ago
- ☆27Oct 30, 2026Updated last week
- Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images☆14Feb 4, 2019Updated 7 years ago
- A FAIR data management and image analysis framework. FAIR stands for Findable, Accessible, Interoperable and Reusable.☆11Aug 25, 2025Updated last year
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆31Jun 16, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Repository containing the official PyTorch implementation of the paper Deep Random Features for Scalable Interpolation of Spatiotemporal …☆14Dec 17, 2024Updated last year
- This project shows how to use Python to create map-based desktop backgrounds.☆12Aug 27, 2024Updated 2 years ago
- Dataset EXploration & Processing☆33May 11, 2023Updated 3 years ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆58Nov 13, 2025Updated 11 months ago
- [student project] UI to run SQL on Delta Lake tables and visualize the variations of the result among tables versions☆12Apr 21, 2020Updated 6 years ago
- Cython compilation support for marimo notebooks☆16Mar 5, 2026Updated 8 months ago
- The purpose of this project is to make it easy to use the HoloViz ecosystem with Quarto☆12Dec 28, 2023Updated 2 years ago