ananswam / bioscrapeLinks
bioscrape (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)
☆17Updated 5 years ago
Alternatives and similar repositories for bioscrape
Users that are interested in bioscrape are comparing it to the libraries listed below
Sorting:
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆38Updated 2 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated last month
- Dynamic Flux Balance analysis in Python☆11Updated 10 years ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆65Updated 9 months ago
- A python wrapper for the benchling api☆50Updated 5 years ago
- python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.☆34Updated 2 years ago
- A platform to do RNA science☆27Updated 4 years ago
- A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)☆26Updated 4 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 7 years ago
- ☆26Updated 2 months ago
- bioinformatics visualization tools with pyviz/bokeh☆20Updated 2 years ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 9 years ago
- Online tool for comparing prices and feasibility of DNA synthesis☆22Updated 2 years ago
- A Python package for mapping sequence aligned data onto protein structures☆37Updated 4 years ago
- Web application enabling users and software to browse, upload, and share synthetic biology designs☆79Updated last week
- A route planner for DNA assembly☆36Updated 9 months ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15Updated 8 months ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆46Updated 8 months ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- A Python framework for structural systems biology☆109Updated 5 years ago
- Example usage of the Benchling API: https://docs.benchling.com/☆35Updated 8 months ago
- Analysis of ensembles of metabolic network reconstructions☆21Updated this week
- 🎨 Python library to plot multi-part genetic constructs☆25Updated 10 months ago
- Library of Integrated Cellular Signatures L1000☆31Updated 3 years ago
- cameo - computer aided metabolic engineering & optimization☆124Updated 3 years ago
- A high-fidelity E. coli RNA-seq compendium☆33Updated 4 years ago
- An RNA manipulation library.☆56Updated last year
- localCIDER - sequence analysis tool for disordered protein sequences☆25Updated 2 years ago
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆24Updated 2 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago