Alternatives and similar repositories for bioscrape

Users that are interested in bioscrape are comparing it to the libraries listed below

• pstjohn / dFBA
  Dynamic Flux Balance analysis in Python
  ☆11Updated 9 years ago
• Global-Biofoundries-Alliance / DNA-scanner
  Online tool for comparing prices and feasibility of DNA synthesis
  ☆20Updated 2 years ago
• Edinburgh-Genome-Foundry / kappagate
  Predict DNA assembly clone validity rates - powered by Kappa
  ☆10Updated 4 years ago
• benchling / clustalo-python
  A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)
  ☆24Updated 3 years ago
• Edinburgh-Genome-Foundry / Primavera
  Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.
  ☆33Updated last month
• fjossinet / RNA-Science-Toolbox
  A platform to do RNA science
  ☆27Updated 4 years ago
• Pappulab / localCIDER
  localCIDER - sequence analysis tool for disordered protein sequences
  ☆23Updated 2 years ago
• Edinburgh-Genome-Foundry / BandWagon
  🎺 Plot DNA digestion band patterns with Python
  ☆20Updated 3 weeks ago
• Edinburgh-Genome-Foundry / DnaWeaver
  A route planner for DNA assembly
  ☆33Updated 3 weeks ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆35Updated 4 years ago
• Edinburgh-Genome-Foundry / SBOL-Visual-CSS
  Draw genetic elements with HTML & CSS
  ☆16Updated 8 years ago
• Edinburgh-Genome-Foundry / BandWitch
  💫 Computer-aided DNA assembly validation and identification from restriction digests.
  ☆15Updated last week
• Edinburgh-Genome-Foundry / Caravagene
  🎨 Python library to plot multi-part genetic constructs
  ☆25Updated last month
• normandavey / ProcessedAlphafold
  ☆31Updated 3 years ago
• harmslab / epistasis
  A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.
  ☆34Updated last year
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆56Updated 7 months ago
• krassowski / multi-omics-state-of-the-field
  Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
  ☆27Updated last year
• Lattice-Automation / synbio
  a DNA assembly library
  ☆22Updated last year
• dmnfarrell / pybioviz
  bioinformatics visualization tools with pyviz/bokeh
  ☆20Updated last year
• lakigigar / bioRxiv-diff
  ☆12Updated 9 months ago
• Edinburgh-Genome-Foundry / genome_collector
  Easily download genomes and build BLAST/Bowtie indexes in Python
  ☆21Updated 2 years ago
• SBRG / Protein_ML
  Machine learning workflows for analyzing high-throughput protein data
  ☆26Updated 8 years ago
• ViennaRNA / RNAsketch
  Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.
  ☆21Updated 6 years ago
• usnistgov / lantern
  Interpretable genotype-phenotype landscape modeling
  ☆35Updated last year
• jvrana / benchling-api
  A python wrapper for the benchling api
  ☆50Updated 4 years ago
• Edinburgh-Genome-Foundry / DnaCauldron
  Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
  ☆58Updated 3 weeks ago
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆29Updated last year
• matthiaskoenig / dfba
  Encoding Dynamic Flux Balance Analysis in SBML
  ☆12Updated 4 years ago
• cssblab / iOmicsPASS
  Data Integration tool utilizing network information for predictive analyses
  ☆16Updated 3 weeks ago
• IdoSpringer / ERGO
  ERGO is a deep learing based model for predicting TCR-peptide binding.
  ☆17Updated 2 years ago