douglaslab / plasmid-viewer
web viewer for plasmid DNA, RNA, and proteins
☆14Updated 7 years ago
Related projects ⓘ
Alternatives and complementary repositories for plasmid-viewer
- 🎨 Python library to plot multi-part genetic constructs☆25Updated last year
- Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)☆149Updated 2 months ago
- A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)☆21Updated 2 years ago
- Coral, a library and framework for specifying synthetic biology design processes.☆33Updated last year
- Find common blocks and differences between DNA sequences☆40Updated 2 years ago
- Codon usage tables in code-friendly format + Python bindings☆35Updated 2 years ago
- A python wrapper for the benchling api☆50Updated 4 years ago
- Read DNA sequences from colourful Microsoft Word documents☆32Updated last year
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆51Updated last year
- Orpheum (Previously called and published under sencha) is a Python package for directly translating RNA-seq reads into coding protein seq…☆18Updated 2 years ago
- 🎺 Plot DNA digestion band patterns with Python☆19Updated 2 years ago
- A route planner for DNA assembly☆29Updated last year
- Python Implementation of Codon Adaption Index☆34Updated last year
- Tool for estimating growth rates from microbial growth curves☆27Updated 3 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Python☆21Updated 2 years ago
- repository-based plasmid design☆28Updated last year
- D3.js based visualizations of cobrapy metabolic models☆41Updated 4 years ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆33Updated last year
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆52Updated 9 years ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Updated 2 years ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆41Updated last month
- Create force-directed graphs of RNA secondary structures.☆100Updated 4 years ago
- Reference-guided multiple sequence alignment of viral genomes☆61Updated 2 months ago
- A multiple sequence alignment viewer☆18Updated 2 weeks ago
- Protein structure comparison tools such as SSAP and SNAP☆60Updated last year
- Draw genetic elements with HTML & CSS☆16Updated 7 years ago
- sensitive and precise assembly of short sequencing reads☆149Updated last month
- Tandem Repeat Annotation Library☆24Updated last year