HanLab-OSU / MouseActivity
☆12Updated 3 months ago
Related projects: ⓘ
- a module for kinematic analysis of deeplabcut outputs☆132Updated 9 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆34Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆24Updated 2 years ago
- Open Ephys plugins for tracking experiments☆10Updated 4 years ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆45Updated 4 months ago
- Free, platform independent, behavior tracking software.☆118Updated 2 months ago
- Various scripts to support deeplabcut and what to do afterwards!☆141Updated 10 months ago
- R Scripts to analyze deep lab cut point data and related data☆60Updated last year
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated last year
- Fiber Photometry Modular Analysis Tool Suite☆32Updated 3 years ago
- ☆70Updated 2 weeks ago
- Automatic Mobility Based Behavioral Quantification ( Forced Swim Test, Tail Suspension Test )☆14Updated 3 weeks ago
- A curated list of awesome Neuropixels resources.☆68Updated 3 weeks ago
- A gui for browsing joint calcium imaging + behavioral data.☆49Updated last month
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆189Updated 7 months ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆63Updated 3 weeks ago
- Registration of cells across sessions.☆67Updated last month
- End-user version of the Mouse Action Recognition System (MARS)☆58Updated 5 months ago
- Tools to work with Allen Inst CCF data in matlab☆122Updated 6 months ago
- Fiber photometry analysis☆19Updated 2 months ago
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆288Updated this week
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆174Updated last month
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆109Updated 2 weeks ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆53Updated 3 months ago
- ☆11Updated 8 years ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆12Updated 2 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆50Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆65Updated this week
- Info on seting up and recording home cage videos☆11Updated 2 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆154Updated last week